Merge branch '_so_push' into _so_main_push

fix(deps): bump pydantic 1.10.9 → 1.10.13 (CVE-2024-3772)
Fixes ReDoS vulnerability in pydantic email validation regex. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-10 17:13:08 +00:00 · 2026-03-10 17:12:47 +00:00 · 2026-03-10 17:09:45 +00:00 · 2026-03-10 16:53:55 +00:00 · 2026-03-10 14:56:22 +00:00 · 2026-03-10 08:37:53 +00:00
69 changed files with 1758 additions and 3528 deletions
@@ -1,2 +1,2 @@
-Change this file to trigger running the test-database CI job
+Change this file to trigger running the test-database CI job
 Trigger test run
@@ -1 +0,0 @@
-pebbles.db
@@ -1 +1,3 @@
-{"project": "stack-orchestrator", "prefix": "so"}
+{
+  "prefix": "so"
+}
@@ -1,10 +1,15 @@
-{"type": "create", "timestamp": "2026-03-18T14:45:07.038870Z", "issue_id": "so-a1a", "payload": {"title": "deploy create should support external credential injection", "type": "feature", "priority": "2", "description": "deploy create generates config.env but provides no mechanism to inject external credentials (API keys, tokens, etc.) at creation time. Operators must append to config.env after the fact, which mutates a build artifact. deploy create should accept --credentials-file or similar to include secrets in the generated config.env."}}
-{"type": "create", "timestamp": "2026-03-18T14:45:07.038942Z", "issue_id": "so-b2b", "payload": {"title": "REGISTRY_TOKEN / imagePullSecret flow undocumented", "type": "bug", "priority": "2", "description": "create_registry_secret() exists in deployment_create.py and is called during up(), but REGISTRY_TOKEN is not documented in spec.yml or any user-facing docs. The restart command warns \"Registry token env var REGISTRY_TOKEN not set, skipping registry secret\" but doesn't explain how to set it. For GHCR private images, this is required and the flow from spec.yml -> config.env -> imagePullSecret needs documentation."}}
-{"type": "create", "timestamp": "2026-03-18T19:10:00.000000Z", "issue_id": "so-k1k", "payload": {"title": "Stack path resolution differs between deploy create and deployment restart", "type": "bug", "priority": "2", "description": "deploy create resolves --stack as a relative path from cwd. deployment restart resolves --stack-path as absolute, then computes repo_root as 4 parents up (assuming stack_orchestrator/data/stacks/name structure). External stacks with different nesting depths (e.g. stack-orchestrator/stacks/name = 3 levels) get wrong repo_root, causing --spec-file resolution to fail. The two commands should use the same path resolution logic."}}
-{"type": "create", "timestamp": "2026-03-18T19:25:00.000000Z", "issue_id": "so-l2l", "payload": {"title": "deployment restart should update in place, not delete/recreate", "type": "bug", "priority": "1", "description": "deployment restart deletes the entire namespace then recreates everything from scratch. This causes:\n\n1. **Downtime** — nothing serves traffic between delete and successful recreate\n2. **No rollback** — deleting the namespace destroys ReplicaSet revision history\n3. **Race conditions** — namespace may still be terminating when up() tries to create\n4. **Cascading failures** — if ANY container fails to start, the entire site is down with no fallback\n\nFix: three changes needed.\n\n**A. up() should create-or-update, not just create.** Use patch/apply semantics for Deployments, Services, Ingresses. When the pod spec changes (new env vars, new image), k8s creates a new ReplicaSet, scales it up, waits for readiness probes, then scales the old one down. Old pods serve traffic until new pods are healthy.\n\n**B. down() should never delete the namespace on restart.** Only on explicit teardown. The namespace owns the revision history. Current code: _delete_namespace() on every down(). Should: delete individual resources by label for teardown, do nothing for restart (let update-in-place handle it).\n\n**C. All containers need readiness probes.** Without them k8s considers pods ready immediately, defeating rolling update safety. laconic-so should generate readiness probes from the http-proxy routes in spec.yml (if a container has an http route, probe that port).\n\nWith these changes, k8s native rolling updates provide zero-downtime deploys and automatic rollback (if new pods fail readiness, rollout stalls, old pods keep serving).\n\nSource files:\n- deploy_k8s.py: up(), down(), _create_deployment(), _delete_namespace()\n- cluster_info.py: pod spec generation (needs readiness probes)\n- deployment.py: restart() orchestration"}}
-{"type": "create", "timestamp": "2026-03-18T20:15:03.000000Z", "issue_id": "so-m3m", "payload": {"title": "Add credentials-files spec key for on-disk credential injection", "type": "feature", "priority": "1", "description": "deployment restart regenerates config.env from spec.yml, wiping credentials that were appended from on-disk files (e.g. ~/.credentials/*.env). Operators must append credentials after deploy create, which is fragile and breaks on restart.\n\nFix: New top-level spec key credentials-files. _write_config_file() reads each file and appends its contents to config.env after writing config vars. Files are read at deploy time from the deployment host.\n\nSpec syntax:\n  credentials-files:\n    - ~/.credentials/dumpster-secrets.env\n    - ~/.credentials/dumpster-r2.env\n\nFiles:\n- deploy/spec.py: add get_credentials_files() returning list of paths\n- deploy/deployment_create.py: in _write_config_file(), after writing config vars, read and append each credentials file (expand ~ to home dir)\n\nAlso update dumpster-stack spec.yml to use the new key and remove the ansible credential append workaround from woodburn_deployer (group_vars/all.yml credentials_env_files, stack_deploy role append tasks, restart_dumpster.yml credential steps). Those cleanups are in the woodburn_deployer repo."}}
-{"type":"status_update","timestamp":"2026-03-18T21:54:12.59148256Z","issue_id":"so-m3m","payload":{"status":"in_progress"}}
-{"type":"close","timestamp":"2026-03-18T21:55:31.6035544Z","issue_id":"so-m3m","payload":{}}
-{"type": "create", "timestamp": "2026-03-20T23:05:00.000000Z", "issue_id": "so-n1n", "payload": {"title": "Merge kind-mount-propagation branch — HostToContainer propagation for extraMounts", "type": "feature", "priority": "2", "description": "The kind-mount-root feature was cherry-picked to main (commit 8d03083d) but the mount propagation fix (commit 929bdab8 on branch enya-ac868cc4-kind-mount-propagation-fix) adds HostToContainer propagation so host submounts propagate into the Kind node. This is needed for ZFS child datasets and tmpfs mounts under the root. Cherry-pick 929bdab8 to main."}}
-{"type": "create", "timestamp": "2026-03-20T23:05:00.000000Z", "issue_id": "so-o2o", "payload": {"title": "etcd cert backup not persisting across cluster deletion", "type": "bug", "priority": "1", "description": "The extraMount for etcd at data/cluster-backups/<id>/etcd is configured but after cluster deletion the directory is empty. Caddy TLS certificates stored in etcd are lost. Either etcd isn't writing to the host mount, or the cleanup code is deleting the backup. Investigate _clean_etcd_keeping_certs in helpers.py."}}
-{"type": "create", "timestamp": "2026-03-21T00:20:00.000000Z", "issue_id": "so-p3p", "payload": {"title": "laconic-so should manage Caddy ingress image lifecycle", "type": "feature", "priority": "2", "description": "The Caddy ingress controller image is hardcoded in ingress-caddy-kind-deploy.yaml. There's no mechanism to update it without manual kubectl commands or cluster recreation. laconic-so should: 1) Allow spec.yml to specify a custom Caddy image, 2) Support updating the Caddy image as part of deployment restart, 3) Set strategy: Recreate on the Caddy Deployment (hostPort pods can't do RollingUpdate). This would let cryovial or similar tooling trigger Caddy updates through the normal deployment pipeline."}}
+{"type":"create","timestamp":"2026-03-08T06:56:07.080584539Z","issue_id":"so-076","payload":{"description":"Currently laconic-so maps one stack to one deployment to one pod. All containers\nin a stack's compose files become containers in a single k8s pod. This means:\n\n- Can't upgrade doublezero without restarting agave-validator\n- Can't restart monitoring without disrupting the validator\n- Can't independently scale or lifecycle-manage components\n\nThe fix is stack composition. A meta-stack (e.g. biscayne-stack) composes\nsub-stacks (agave, doublezero, agave-monitoring), each becoming its own\nk8s Deployment with independent lifecycle.","priority":"2","title":"Stack composition: deploy multiple stacks into one kind cluster","type":"epic"}}
+{"type":"create","timestamp":"2026-03-08T06:56:07.551986919Z","issue_id":"so-ab0","payload":{"description":"Add laconic-so deployment prepare that creates cluster infrastructure without pods. Already implemented, needs review.","priority":"2","title":"deployment prepare command","type":"task"}}
+{"type":"create","timestamp":"2026-03-08T06:56:07.884418759Z","issue_id":"so-04f","payload":{"description":"deployment stop on ANY deployment deletes the shared kind cluster. Should only delete its own namespace.","priority":"2","title":"deployment stop should not destroy shared cluster","type":"bug"}}
+{"type":"create","timestamp":"2026-03-08T06:56:08.253520249Z","issue_id":"so-370","payload":{"description":"Allow stack.yml to reference sub-stacks. Each sub-stack becomes its own k8s Deployment sharing namespace and PVs.","priority":"2","title":"Add stacks: field to stack.yml for composition","type":"task"}}
+{"type":"create","timestamp":"2026-03-08T06:56:08.646764337Z","issue_id":"so-f7c","payload":{"description":"Create three independent stacks from the monolithic agave-stack. Each gets its own compose file and independent lifecycle.","priority":"2","title":"Split agave-stack into agave + doublezero + monitoring","type":"task"}}
+{"type":"rename","timestamp":"2026-03-08T06:56:14.499990161Z","issue_id":"so-ab0","payload":{"new_id":"so-076.1"}}
+{"type":"dep_add","timestamp":"2026-03-08T06:56:14.499992031Z","issue_id":"so-076.1","payload":{"dep_type":"parent-child","depends_on":"so-076"}}
+{"type":"rename","timestamp":"2026-03-08T06:56:14.786407752Z","issue_id":"so-04f","payload":{"new_id":"so-076.2"}}
+{"type":"dep_add","timestamp":"2026-03-08T06:56:14.786409842Z","issue_id":"so-076.2","payload":{"dep_type":"parent-child","depends_on":"so-076"}}
+{"type":"rename","timestamp":"2026-03-08T06:56:15.058959714Z","issue_id":"so-370","payload":{"new_id":"so-076.3"}}
+{"type":"dep_add","timestamp":"2026-03-08T06:56:15.058961364Z","issue_id":"so-076.3","payload":{"dep_type":"parent-child","depends_on":"so-076"}}
+{"type":"rename","timestamp":"2026-03-08T06:56:15.410080785Z","issue_id":"so-f7c","payload":{"new_id":"so-076.4"}}
+{"type":"dep_add","timestamp":"2026-03-08T06:56:15.410082305Z","issue_id":"so-076.4","payload":{"dep_type":"parent-child","depends_on":"so-076"}}
+{"type":"dep_add","timestamp":"2026-03-08T06:56:16.313585082Z","issue_id":"so-076.3","payload":{"dep_type":"blocks","depends_on":"so-076.2"}}
+{"type":"dep_add","timestamp":"2026-03-08T06:56:16.567629422Z","issue_id":"so-076.4","payload":{"dep_type":"blocks","depends_on":"so-076.3"}}
@@ -68,7 +68,7 @@ $ laconic-so build-npms --include <package-name> --force-rebuild

 ## deploy

-The `deploy` command group manages persistent deployments. The general workflow is `deploy init` to generate a spec file, then `deploy create` to create a deployment directory from the spec, then runtime commands like `deployment start` and `deployment stop`.
+The `deploy` command group manages persistent deployments. The general workflow is `deploy init` to generate a spec file, then `deploy create` to create a deployment directory from the spec, then runtime commands like `deploy up` and `deploy down`.

 ### deploy init

@@ -101,91 +101,35 @@ Options:
 - `--spec-file` (required): spec file to use
 - `--deployment-dir`: target directory for deployment files
 - `--update`: update an existing deployment directory, preserving data volumes and env file. Changed files are backed up with a `.bak` suffix. The deployment's `config.env` and `deployment.yml` are also preserved.
- `--helm-chart`: generate Helm chart instead of deploying (k8s only)
 - `--network-dir`: network configuration supplied in this directory
 - `--initial-peers`: initial set of persistent peers

-## deployment
+### deploy up

-Runtime commands for managing a created deployment. Use `--dir` to specify the deployment directory.
-
-### deployment start
-
-Start a deployment (`up` is a legacy alias):
+Start a deployment:
 ```
-$ laconic-so deployment --dir <deployment-dir> start
+$ laconic-so deployment --dir <deployment-dir> up
 ```

-Options:
- `--stay-attached` / `--detatch-terminal`: attach to container stdout (default: detach)
- `--skip-cluster-management` / `--perform-cluster-management`: skip kind cluster creation/teardown (default: perform management). Only affects k8s-kind deployments. Use this when multiple stacks share a single cluster.
+### deploy down

-### deployment stop
-
-Stop a deployment (`down` is a legacy alias):
+Stop a deployment:
 ```
-$ laconic-so deployment --dir <deployment-dir> stop
+$ laconic-so deployment --dir <deployment-dir> down
 ```
+Use `--delete-volumes` to also remove data volumes.

-Options:
- `--delete-volumes` / `--preserve-volumes`: delete data volumes on stop (default: preserve)
- `--skip-cluster-management` / `--perform-cluster-management`: skip kind cluster teardown (default: perform management). Use this to stop a single deployment without destroying a shared cluster.
-
-### deployment restart
-
-Restart a deployment with GitOps-aware workflow. Pulls latest stack code, syncs the deployment directory from the git-tracked spec, and restarts services:
-```
-$ laconic-so deployment --dir <deployment-dir> restart
-```
-
-See [deployment_patterns.md](deployment_patterns.md) for the recommended GitOps workflow.
-
-### deployment ps
+### deploy ps

 Show running services:
 ```
 $ laconic-so deployment --dir <deployment-dir> ps
 ```

-### deployment logs
+### deploy logs

 View service logs:
 ```
 $ laconic-so deployment --dir <deployment-dir> logs
 ```
 Use `-f` to follow and `-n <count>` to tail.
-
-### deployment exec
-
-Execute a command in a running service container:
-```
-$ laconic-so deployment --dir <deployment-dir> exec <service-name> "<command>"
-```
-
-### deployment status
-
-Show deployment status:
-```
-$ laconic-so deployment --dir <deployment-dir> status
-```
-
-### deployment port
-
-Show mapped ports for a service:
-```
-$ laconic-so deployment --dir <deployment-dir> port <service-name> <port>
-```
-
-### deployment push-images
-
-Push deployment images to a registry:
-```
-$ laconic-so deployment --dir <deployment-dir> push-images
-```
-
-### deployment run-job
-
-Run a one-time job in the deployment:
-```
-$ laconic-so deployment --dir <deployment-dir> run-job <job-name>
-```
@@ -30,7 +30,7 @@ git commit -m "Add my-stack deployment configuration"
 git push

 # On deployment server: deploy from git-tracked spec
-laconic-so --stack my-stack deploy create \
+laconic-so deploy create \
  --spec-file /path/to/operator-repo/spec.yml \
  --deployment-dir my-deployment

@@ -25,7 +25,7 @@ dependencies = [
    "click>=8.1.6",
    "PyYAML>=6.0.1",
    "ruamel.yaml>=0.17.32",
-    "pydantic==1.10.9",
+    "pydantic==1.10.13",
    "tomli==2.0.1",
    "validators==0.22.0",
    "kubernetes>=28.1.0",
@@ -6,7 +6,7 @@ python-on-whales>=0.64.0
 click>=8.1.6
 PyYAML>=6.0.1
 ruamel.yaml>=0.17.32
-pydantic==1.10.9
+pydantic==1.10.13
 tomli==2.0.1
 validators==0.22.0
 kubernetes>=28.1.0
@@ -1,12 +1,12 @@
 # See
 # https://medium.com/nerd-for-tech/how-to-build-and-distribute-a-cli-tool-with-python-537ae41d9d78
-from setuptools import setup, find_packages
+from setuptools import find_packages, setup

-with open("README.md", "r", encoding="utf-8") as fh:
+with open("README.md", encoding="utf-8") as fh:
    long_description = fh.read()
-with open("requirements.txt", "r", encoding="utf-8") as fh:
+with open("requirements.txt", encoding="utf-8") as fh:
    requirements = fh.read()
-with open("stack_orchestrator/data/version.txt", "r", encoding="utf-8") as fh:
+with open("stack_orchestrator/data/version.txt", encoding="utf-8") as fh:
    version = fh.readlines()[-1].strip(" \n")
 setup(
    name="laconic-stack-orchestrator",
@@ -15,9 +15,11 @@

 import os
 from abc import ABC, abstractmethod
-from stack_orchestrator.deploy.deploy import get_stack_status
+
 from decouple import config

+from stack_orchestrator.deploy.deploy import get_stack_status
+

 def get_stack(config, stack):
    if stack == "package-registry":
@@ -22,17 +22,19 @@
 # allow re-build of either all or specific containers

 import os
-import sys
-from decouple import config
 import subprocess
-import click
+import sys
 from pathlib import Path
-from stack_orchestrator.opts import opts
-from stack_orchestrator.util import include_exclude_check, stack_is_external, error_exit
+
+import click
+from decouple import config
+
 from stack_orchestrator.base import get_npm_registry_url
 from stack_orchestrator.build.build_types import BuildContext
-from stack_orchestrator.build.publish import publish_image
 from stack_orchestrator.build.build_util import get_containers_in_scope
+from stack_orchestrator.build.publish import publish_image
+from stack_orchestrator.opts import opts
+from stack_orchestrator.util import error_exit, include_exclude_check, stack_is_external

 # TODO: find a place for this
 #    epilog="Config provided either in .env or settings.ini or env vars:
@@ -59,9 +61,7 @@ def make_container_build_env(
    container_build_env.update({"CERC_SCRIPT_DEBUG": "true"} if debug else {})
    container_build_env.update({"CERC_FORCE_REBUILD": "true"} if force_rebuild else {})
    container_build_env.update(
-        {"CERC_CONTAINER_EXTRA_BUILD_ARGS": extra_build_args}
-        if extra_build_args
-        else {}
+        {"CERC_CONTAINER_EXTRA_BUILD_ARGS": extra_build_args} if extra_build_args else {}
    )
    docker_host_env = os.getenv("DOCKER_HOST")
    if docker_host_env:
@@ -81,12 +81,8 @@ def process_container(build_context: BuildContext) -> bool:

    # Check if this is in an external stack
    if stack_is_external(build_context.stack):
-        container_parent_dir = Path(build_context.stack).parent.parent.joinpath(
-            "container-build"
-        )
-        temp_build_dir = container_parent_dir.joinpath(
-            build_context.container.replace("/", "-")
-        )
+        container_parent_dir = Path(build_context.stack).parent.parent.joinpath("container-build")
+        temp_build_dir = container_parent_dir.joinpath(build_context.container.replace("/", "-"))
        temp_build_script_filename = temp_build_dir.joinpath("build.sh")
        # Now check if the container exists in the external stack.
        if not temp_build_script_filename.exists():
@@ -104,18 +100,13 @@ def process_container(build_context: BuildContext) -> bool:
        build_command = build_script_filename.as_posix()
    else:
        if opts.o.verbose:
-            print(
-                f"No script file found: {build_script_filename}, "
-                "using default build script"
-            )
+            print(f"No script file found: {build_script_filename}, " "using default build script")
        repo_dir = build_context.container.split("/")[1]
        # TODO: make this less of a hack -- should be specified in
        # some metadata somewhere. Check if we have a repo for this
        # container. If not, set the context dir to container-build subdir
        repo_full_path = os.path.join(build_context.dev_root_path, repo_dir)
-        repo_dir_or_build_dir = (
-            repo_full_path if os.path.exists(repo_full_path) else build_dir
-        )
+        repo_dir_or_build_dir = repo_full_path if os.path.exists(repo_full_path) else build_dir
        build_command = (
            os.path.join(build_context.container_build_dir, "default-build.sh")
            + f" {default_container_tag} {repo_dir_or_build_dir}"
@@ -159,9 +150,7 @@ def process_container(build_context: BuildContext) -> bool:
    default=False,
    help="Publish the built images in the specified image registry",
 )
-@click.option(
-    "--image-registry", help="Specify the image registry for --publish-images"
-)
+@click.option("--image-registry", help="Specify the image registry for --publish-images")
@click.pass_context
 def command(
    ctx,
@@ -185,14 +174,9 @@ def command(

    if local_stack:
        dev_root_path = os.getcwd()[0 : os.getcwd().rindex("stack-orchestrator")]
-        print(
-            f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: "
-            f"{dev_root_path}"
-        )
+        print(f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: " f"{dev_root_path}")
    else:
-        dev_root_path = os.path.expanduser(
-            config("CERC_REPO_BASE_DIR", default="~/cerc")
-        )
+        dev_root_path = os.path.expanduser(config("CERC_REPO_BASE_DIR", default="~/cerc"))

    if not opts.o.quiet:
        print(f"Dev Root is: {dev_root_path}")
@@ -230,10 +214,7 @@ def command(
            else:
                print(f"Error running build for {build_context.container}")
                if not opts.o.continue_on_error:
-                    error_exit(
-                        "container build failed and --continue-on-error "
-                        "not set, exiting"
-                    )
+                    error_exit("container build failed and --continue-on-error " "not set, exiting")
                    sys.exit(1)
                else:
                    print(
@@ -18,15 +18,17 @@
 # env vars:
 # CERC_REPO_BASE_DIR defaults to ~/cerc

+import importlib.resources
 import os
 import sys
-from shutil import rmtree, copytree
-from decouple import config
+from shutil import copytree, rmtree
+
 import click
-import importlib.resources
-from python_on_whales import docker, DockerException
+from decouple import config
+from python_on_whales import DockerException, docker
+
 from stack_orchestrator.base import get_stack
-from stack_orchestrator.util import include_exclude_check, get_parsed_stack_config
+from stack_orchestrator.util import get_parsed_stack_config, include_exclude_check

 builder_js_image_name = "cerc/builder-js:local"

@@ -70,14 +72,9 @@ def command(ctx, include, exclude, force_rebuild, extra_build_args):

    if local_stack:
        dev_root_path = os.getcwd()[0 : os.getcwd().rindex("stack-orchestrator")]
-        print(
-            f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: "
-            f"{dev_root_path}"
-        )
+        print(f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: " f"{dev_root_path}")
    else:
-        dev_root_path = os.path.expanduser(
-            config("CERC_REPO_BASE_DIR", default="~/cerc")
-        )
+        dev_root_path = os.path.expanduser(config("CERC_REPO_BASE_DIR", default="~/cerc"))

    build_root_path = os.path.join(dev_root_path, "build-trees")

@@ -94,9 +91,7 @@ def command(ctx, include, exclude, force_rebuild, extra_build_args):
    # See: https://stackoverflow.com/a/20885799/1701505
    from stack_orchestrator import data

-    with importlib.resources.open_text(
-        data, "npm-package-list.txt"
-    ) as package_list_file:
+    with importlib.resources.open_text(data, "npm-package-list.txt") as package_list_file:
        all_packages = package_list_file.read().splitlines()

    packages_in_scope = []
@@ -132,8 +127,7 @@ def command(ctx, include, exclude, force_rebuild, extra_build_args):
        build_command = [
            "sh",
            "-c",
-            "cd /workspace && "
-            f"build-npm-package-local-dependencies.sh {npm_registry_url}",
+            "cd /workspace && " f"build-npm-package-local-dependencies.sh {npm_registry_url}",
        ]
        if not dry_run:
            if verbose:
@@ -151,9 +145,7 @@ def command(ctx, include, exclude, force_rebuild, extra_build_args):
            envs.update({"CERC_SCRIPT_DEBUG": "true"} if debug else {})
            envs.update({"CERC_FORCE_REBUILD": "true"} if force_rebuild else {})
            envs.update(
-                {"CERC_CONTAINER_EXTRA_BUILD_ARGS": extra_build_args}
-                if extra_build_args
-                else {}
+                {"CERC_CONTAINER_EXTRA_BUILD_ARGS": extra_build_args} if extra_build_args else {}
            )
            try:
                docker.run(
@@ -176,16 +168,10 @@ def command(ctx, include, exclude, force_rebuild, extra_build_args):
            except DockerException as e:
                print(f"Error executing build for {package} in container:\n {e}")
                if not continue_on_error:
-                    print(
-                        "FATAL Error: build failed and --continue-on-error "
-                        "not set, exiting"
-                    )
+                    print("FATAL Error: build failed and --continue-on-error " "not set, exiting")
                    sys.exit(1)
                else:
-                    print(
-                        "****** Build Error, continuing because "
-                        "--continue-on-error is set"
-                    )
+                    print("****** Build Error, continuing because " "--continue-on-error is set")

        else:
            print("Skipped")
@@ -203,10 +189,7 @@ def _ensure_prerequisites():
    # Tell the user how to build it if not
    images = docker.image.list(builder_js_image_name)
    if len(images) == 0:
-        print(
-            f"FATAL: builder image: {builder_js_image_name} is required "
-            "but was not found"
-        )
+        print(f"FATAL: builder image: {builder_js_image_name} is required " "but was not found")
        print(
            "Please run this command to create it: "
            "laconic-so --stack build-support build-containers"
@@ -16,7 +16,6 @@

 from dataclasses import dataclass
 from pathlib import Path
-from typing import Mapping


@dataclass
@@ -24,5 +23,5 @@ class BuildContext:
    stack: str
    container: str
    container_build_dir: Path
-    container_build_env: Mapping[str, str]
+    container_build_env: dict[str, str]
    dev_root_path: str
@@ -30,9 +30,7 @@ def get_containers_in_scope(stack: str):
        # See: https://stackoverflow.com/a/20885799/1701505
        from stack_orchestrator import data

-        with importlib.resources.open_text(
-            data, "container-image-list.txt"
-        ) as container_list_file:
+        with importlib.resources.open_text(data, "container-image-list.txt") as container_list_file:
            containers_in_scope = container_list_file.read().splitlines()

    if opts.o.verbose:
@@ -23,20 +23,19 @@

 import os
 import sys
-
-from decouple import config
-import click
 from pathlib import Path
+
+import click
+from decouple import config
+
 from stack_orchestrator.build import build_containers
-from stack_orchestrator.deploy.webapp.util import determine_base_container, TimedLogger
 from stack_orchestrator.build.build_types import BuildContext
+from stack_orchestrator.deploy.webapp.util import TimedLogger, determine_base_container


@click.command()
@click.option("--base-container")
-@click.option(
-    "--source-repo", help="directory containing the webapp to build", required=True
-)
+@click.option("--source-repo", help="directory containing the webapp to build", required=True)
@click.option(
    "--force-rebuild",
    is_flag=True,
@@ -64,13 +63,10 @@ def command(ctx, base_container, source_repo, force_rebuild, extra_build_args, t
    if local_stack:
        dev_root_path = os.getcwd()[0 : os.getcwd().rindex("stack-orchestrator")]
        logger.log(
-            f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: "
-            f"{dev_root_path}"
+            f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: " f"{dev_root_path}"
        )
    else:
-        dev_root_path = os.path.expanduser(
-            config("CERC_REPO_BASE_DIR", default="~/cerc")
-        )
+        dev_root_path = os.path.expanduser(config("CERC_REPO_BASE_DIR", default="~/cerc"))

    if verbose:
        logger.log(f"Dev Root is: {dev_root_path}")
@@ -13,19 +13,19 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-import click
-from dataclasses import dataclass
 import json
 import platform
+from dataclasses import dataclass
+
+import click
+import requests
 from python_on_whales import DockerClient
 from python_on_whales.components.manifest.cli_wrapper import ManifestCLI, ManifestList
 from python_on_whales.utils import run
-import requests
-from typing import List

-from stack_orchestrator.opts import opts
-from stack_orchestrator.util import include_exclude_check, error_exit
 from stack_orchestrator.build.build_util import get_containers_in_scope
+from stack_orchestrator.opts import opts
+from stack_orchestrator.util import error_exit, include_exclude_check

 # Experimental fetch-container command

@@ -55,7 +55,7 @@ def _local_tag_for(container: str):
 # $ curl -u "my-username:my-token" -X GET \
 #   "https://<container-registry-hostname>/v2/cerc-io/cerc/test-container/tags/list"
 # {"name":"cerc-io/cerc/test-container","tags":["202402232130","202402232208"]}
-def _get_tags_for_container(container: str, registry_info: RegistryInfo) -> List[str]:
+def _get_tags_for_container(container: str, registry_info: RegistryInfo) -> list[str]:
    # registry looks like: git.vdb.to/cerc-io
    registry_parts = registry_info.registry.split("/")
    url = f"https://{registry_parts[0]}/v2/{registry_parts[1]}/{container}/tags/list"
@@ -68,16 +68,15 @@ def _get_tags_for_container(container: str, registry_info: RegistryInfo) -> List
        tag_info = response.json()
        if opts.o.debug:
            print(f"container tags list: {tag_info}")
-        tags_array = tag_info["tags"]
+        tags_array: list[str] = tag_info["tags"]
        return tags_array
    else:
        error_exit(
-            f"failed to fetch tags from image registry, "
-            f"status code: {response.status_code}"
+            f"failed to fetch tags from image registry, " f"status code: {response.status_code}"
        )


-def _find_latest(candidate_tags: List[str]):
+def _find_latest(candidate_tags: list[str]):
    # Lex sort should give us the latest first
    sorted_candidates = sorted(candidate_tags)
    if opts.o.debug:
@@ -86,8 +85,8 @@ def _find_latest(candidate_tags: List[str]):


 def _filter_for_platform(
-    container: str, registry_info: RegistryInfo, tag_list: List[str]
-) -> List[str]:
+    container: str, registry_info: RegistryInfo, tag_list: list[str]
+) -> list[str]:
    filtered_tags = []
    this_machine = platform.machine()
    # Translate between Python and docker platform names
@@ -151,15 +150,9 @@ def _add_local_tag(remote_tag: str, registry: str, local_tag: str):
    default=False,
    help="Overwrite a locally built image, if present",
 )
-@click.option(
-    "--image-registry", required=True, help="Specify the image registry to fetch from"
-)
-@click.option(
-    "--registry-username", required=True, help="Specify the image registry username"
-)
-@click.option(
-    "--registry-token", required=True, help="Specify the image registry access token"
-)
+@click.option("--image-registry", required=True, help="Specify the image registry to fetch from")
+@click.option("--registry-username", required=True, help="Specify the image registry username")
+@click.option("--registry-token", required=True, help="Specify the image registry access token")
@click.pass_context
 def command(
    ctx,
@@ -14,6 +14,7 @@
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

 from datetime import datetime
+
 from python_on_whales import DockerClient

 from stack_orchestrator.opts import opts
@@ -29,7 +29,6 @@ network_key = "network"
 http_proxy_key = "http-proxy"
 image_registry_key = "image-registry"
 configmaps_key = "configmaps"
-secrets_key = "secrets"
 resources_key = "resources"
 volumes_key = "volumes"
 security_key = "security"
@@ -46,6 +45,3 @@ runtime_class_key = "runtime-class"
 high_memlock_runtime = "high-memlock"
 high_memlock_spec_filename = "high-memlock-spec.json"
 acme_email_key = "acme-email"
-kind_mount_root_key = "kind-mount-root"
-external_services_key = "external-services"
-ca_certificates_key = "ca-certificates"
@@ -1,5 +0,0 @@
-services:
-  test-job:
-    image: cerc/test-container:local
-    entrypoint: /bin/sh
-    command: ["-c", "echo 'Job completed successfully'"]
@@ -2,12 +2,11 @@

 import argparse
 import os
+import random
 import sys
+from subprocess import Popen

 import psycopg
-import random
-
-from subprocess import Popen
 from fabric import Connection


@@ -27,27 +26,19 @@ def dump_src_db_to_file(db_host, db_port, db_user, db_password, db_name, file_na
 def establish_ssh_tunnel(ssh_host, ssh_port, ssh_user, db_host, db_port):
    local_port = random.randint(11000, 12000)
    conn = Connection(host=ssh_host, port=ssh_port, user=ssh_user)
-    fw = conn.forward_local(
-        local_port=local_port, remote_port=db_port, remote_host=db_host
-    )
+    fw = conn.forward_local(local_port=local_port, remote_port=db_port, remote_host=db_host)
    return conn, fw, local_port


 def load_db_from_file(db_host, db_port, db_user, db_password, db_name, file_name):
-    connstr = "host=%s port=%s user=%s password=%s sslmode=disable dbname=%s" % (
-        db_host,
-        db_port,
-        db_user,
-        db_password,
-        db_name,
-    )
+    connstr = f"host={db_host} port={db_port} user={db_user} password={db_password} sslmode=disable dbname={db_name}"
    with psycopg.connect(connstr) as conn:
        with conn.cursor() as cur:
            print(
                f"Importing from {file_name} to {db_host}:{db_port}/{db_name}... ",
                end="",
            )
-            cur.execute(open(file_name, "rt").read())
+            cur.execute(open(file_name).read())
            print("DONE")


@@ -60,9 +51,7 @@ if __name__ == "__main__":
    parser.add_argument("--src-dbpw", help="DB password", required=True)
    parser.add_argument("--src-dbname", help="dbname", default="keycloak")

-    parser.add_argument(
-        "--dst-file", help="Destination filename", default="keycloak-mirror.sql"
-    )
+    parser.add_argument("--dst-file", help="Destination filename", default="keycloak-mirror.sql")

    parser.add_argument("--live-import", help="run the import", action="store_true")

@@ -1,7 +1,8 @@
-from web3.auto import w3
-import ruamel.yaml as yaml
 import sys

+import ruamel.yaml as yaml
+from web3.auto import w3
+
 w3.eth.account.enable_unaudited_hdwallet_features()

 testnet_config_path = "genesis-config.yaml"
@@ -11,8 +12,6 @@ if len(sys.argv) > 1:
 with open(testnet_config_path) as stream:
    data = yaml.safe_load(stream)

-for key, value in data["el_premine"].items():
-    acct = w3.eth.account.from_mnemonic(
-        data["mnemonic"], account_path=key, passphrase=""
-    )
-    print("%s,%s,%s" % (key, acct.address, acct.key.hex()))
+for key, _value in data["el_premine"].items():
+    acct = w3.eth.account.from_mnemonic(data["mnemonic"], account_path=key, passphrase="")
+    print(f"{key},{acct.address},{acct.key.hex()}")
@@ -186,8 +186,8 @@ spec:
          operator: Equal
      containers:
        - name: caddy-ingress-controller
-          image: ghcr.io/laconicnetwork/caddy-ingress:latest
-          imagePullPolicy: Always
+          image: caddy/ingress:latest
+          imagePullPolicy: IfNotPresent
          ports:
            - name: http
              containerPort: 80
@@ -16,13 +16,14 @@

 from pathlib import Path
 from shutil import copy
+
 import yaml


 def create(context, extra_args):
    # Our goal here is just to copy the json files for blast
    yml_path = context.deployment_dir.joinpath("spec.yml")
-    with open(yml_path, "r") as file:
+    with open(yml_path) as file:
        data = yaml.safe_load(file)

    mount_point = data["volumes"]["blast-data"]
@@ -27,8 +27,6 @@ def setup(ctx):
 def create(ctx, extra_args):
    # Generate the JWT secret and save to its config file
    secret = token_hex(32)
-    jwt_file_path = ctx.deployment_dir.joinpath(
-        "data", "mainnet_eth_config_data", "jwtsecret"
-    )
+    jwt_file_path = ctx.deployment_dir.joinpath("data", "mainnet_eth_config_data", "jwtsecret")
    with open(jwt_file_path, "w+") as jwt_file:
        jwt_file.write(secret)
@@ -13,22 +13,23 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-from stack_orchestrator.util import get_yaml
+import os
+import re
+import sys
+from enum import Enum
+from pathlib import Path
+from shutil import copyfile, copytree
+
+import tomli
 from stack_orchestrator.deploy.deploy_types import (
    DeployCommandContext,
    LaconicStackSetupCommand,
 )
+from stack_orchestrator.deploy.deploy_util import VolumeMapping, run_container_command
 from stack_orchestrator.deploy.deployment_context import DeploymentContext
 from stack_orchestrator.deploy.stack_state import State
-from stack_orchestrator.deploy.deploy_util import VolumeMapping, run_container_command
 from stack_orchestrator.opts import opts
-from enum import Enum
-from pathlib import Path
-from shutil import copyfile, copytree
-import os
-import sys
-import tomli
-import re
+from stack_orchestrator.util import get_yaml

 default_spec_file_content = ""

@@ -80,9 +81,7 @@ def _copy_gentx_files(network_dir: Path, gentx_file_list: str):
        gentx_file_path = Path(gentx_file)
        copyfile(
            gentx_file_path,
-            os.path.join(
-                network_dir, "config", "gentx", os.path.basename(gentx_file_path)
-            ),
+            os.path.join(network_dir, "config", "gentx", os.path.basename(gentx_file_path)),
        )


@@ -91,7 +90,7 @@ def _remove_persistent_peers(network_dir: Path):
    if not config_file_path.exists():
        print("Error: config.toml not found")
        sys.exit(1)
-    with open(config_file_path, "r") as input_file:
+    with open(config_file_path) as input_file:
        config_file_content = input_file.read()
        persistent_peers_pattern = '^persistent_peers = "(.+?)"'
        replace_with = 'persistent_peers = ""'
@@ -110,7 +109,7 @@ def _insert_persistent_peers(config_dir: Path, new_persistent_peers: str):
    if not config_file_path.exists():
        print("Error: config.toml not found")
        sys.exit(1)
-    with open(config_file_path, "r") as input_file:
+    with open(config_file_path) as input_file:
        config_file_content = input_file.read()
        persistent_peers_pattern = r'^persistent_peers = ""'
        replace_with = f'persistent_peers = "{new_persistent_peers}"'
@@ -129,7 +128,7 @@ def _enable_cors(config_dir: Path):
    if not config_file_path.exists():
        print("Error: config.toml not found")
        sys.exit(1)
-    with open(config_file_path, "r") as input_file:
+    with open(config_file_path) as input_file:
        config_file_content = input_file.read()
        cors_pattern = r"^cors_allowed_origins = \[]"
        replace_with = 'cors_allowed_origins = ["*"]'
@@ -142,13 +141,11 @@ def _enable_cors(config_dir: Path):
    if not app_file_path.exists():
        print("Error: app.toml not found")
        sys.exit(1)
-    with open(app_file_path, "r") as input_file:
+    with open(app_file_path) as input_file:
        app_file_content = input_file.read()
        cors_pattern = r"^enabled-unsafe-cors = false"
        replace_with = "enabled-unsafe-cors = true"
-        app_file_content = re.sub(
-            cors_pattern, replace_with, app_file_content, flags=re.MULTILINE
-        )
+        app_file_content = re.sub(cors_pattern, replace_with, app_file_content, flags=re.MULTILINE)
    with open(app_file_path, "w") as output_file:
        output_file.write(app_file_content)

@@ -158,7 +155,7 @@ def _set_listen_address(config_dir: Path):
    if not config_file_path.exists():
        print("Error: config.toml not found")
        sys.exit(1)
-    with open(config_file_path, "r") as input_file:
+    with open(config_file_path) as input_file:
        config_file_content = input_file.read()
        existing_pattern = r'^laddr = "tcp://127.0.0.1:26657"'
        replace_with = 'laddr = "tcp://0.0.0.0:26657"'
@@ -172,7 +169,7 @@ def _set_listen_address(config_dir: Path):
    if not app_file_path.exists():
        print("Error: app.toml not found")
        sys.exit(1)
-    with open(app_file_path, "r") as input_file:
+    with open(app_file_path) as input_file:
        app_file_content = input_file.read()
        existing_pattern1 = r'^address = "tcp://localhost:1317"'
        replace_with1 = 'address = "tcp://0.0.0.0:1317"'
@@ -192,10 +189,7 @@ def _phase_from_params(parameters):
    phase = SetupPhase.ILLEGAL
    if parameters.initialize_network:
        if parameters.join_network or parameters.create_network:
-            print(
-                "Can't supply --join-network or --create-network "
-                "with --initialize-network"
-            )
+            print("Can't supply --join-network or --create-network " "with --initialize-network")
            sys.exit(1)
        if not parameters.chain_id:
            print("--chain-id is required")
@@ -207,26 +201,17 @@ def _phase_from_params(parameters):
        phase = SetupPhase.INITIALIZE
    elif parameters.join_network:
        if parameters.initialize_network or parameters.create_network:
-            print(
-                "Can't supply --initialize-network or --create-network "
-                "with --join-network"
-            )
+            print("Can't supply --initialize-network or --create-network " "with --join-network")
            sys.exit(1)
        phase = SetupPhase.JOIN
    elif parameters.create_network:
        if parameters.initialize_network or parameters.join_network:
-            print(
-                "Can't supply --initialize-network or --join-network "
-                "with --create-network"
-            )
+            print("Can't supply --initialize-network or --join-network " "with --create-network")
            sys.exit(1)
        phase = SetupPhase.CREATE
    elif parameters.connect_network:
        if parameters.initialize_network or parameters.join_network:
-            print(
-                "Can't supply --initialize-network or --join-network "
-                "with --connect-network"
-            )
+            print("Can't supply --initialize-network or --join-network " "with --connect-network")
            sys.exit(1)
        phase = SetupPhase.CONNECT
    return phase
@@ -341,8 +326,7 @@ def setup(
        output3, status3 = run_container_command(
            command_context,
            "laconicd",
-            f"laconicd cometbft show-validator "
-            f"--home {laconicd_home_path_in_container}",
+            f"laconicd cometbft show-validator " f"--home {laconicd_home_path_in_container}",
            mounts,
        )
        print(f"Node validator address: {output3}")
@@ -361,23 +345,16 @@ def setup(
            # Copy it into our network dir
            genesis_file_path = Path(parameters.genesis_file)
            if not os.path.exists(genesis_file_path):
-                print(
-                    f"Error: supplied genesis file: {parameters.genesis_file} "
-                    "does not exist."
-                )
+                print(f"Error: supplied genesis file: {parameters.genesis_file} " "does not exist.")
                sys.exit(1)
            copyfile(
                genesis_file_path,
-                os.path.join(
-                    network_dir, "config", os.path.basename(genesis_file_path)
-                ),
+                os.path.join(network_dir, "config", os.path.basename(genesis_file_path)),
            )
        else:
            # We're generating the genesis file
            # First look in the supplied gentx files for the other nodes' keys
-            other_node_keys = _get_node_keys_from_gentx_files(
-                parameters.gentx_address_list
-            )
+            other_node_keys = _get_node_keys_from_gentx_files(parameters.gentx_address_list)
            # Add those keys to our genesis, with balances we determine here (why?)
            outputk = None
            for other_node_key in other_node_keys:
@@ -398,8 +375,7 @@ def setup(
            output1, status1 = run_container_command(
                command_context,
                "laconicd",
-                f"laconicd genesis collect-gentxs "
-                f"--home {laconicd_home_path_in_container}",
+                f"laconicd genesis collect-gentxs " f"--home {laconicd_home_path_in_container}",
                mounts,
            )
            if options.debug:
@@ -416,8 +392,7 @@ def setup(
        output2, status1 = run_container_command(
            command_context,
            "laconicd",
-            f"laconicd genesis validate-genesis "
-            f"--home {laconicd_home_path_in_container}",
+            f"laconicd genesis validate-genesis " f"--home {laconicd_home_path_in_container}",
            mounts,
        )
        print(f"validate-genesis result: {output2}")
@@ -452,9 +427,7 @@ def create(deployment_context: DeploymentContext, extra_args):
        sys.exit(1)
    # Copy the network directory contents into our deployment
    # TODO: change this to work with non local paths
-    deployment_config_dir = deployment_context.deployment_dir.joinpath(
-        "data", "laconicd-config"
-    )
+    deployment_config_dir = deployment_context.deployment_dir.joinpath("data", "laconicd-config")
    copytree(config_dir_path, deployment_config_dir, dirs_exist_ok=True)
    # If supplied, add the initial persistent peers to the config file
    if extra_args[1]:
@@ -465,9 +438,7 @@ def create(deployment_context: DeploymentContext, extra_args):
    _set_listen_address(deployment_config_dir)
    # Copy the data directory contents into our deployment
    # TODO: change this to work with non local paths
-    deployment_data_dir = deployment_context.deployment_dir.joinpath(
-        "data", "laconicd-data"
-    )
+    deployment_data_dir = deployment_context.deployment_dir.joinpath("data", "laconicd-data")
    copytree(data_dir_path, deployment_data_dir, dirs_exist_ok=True)


@@ -13,15 +13,16 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-from stack_orchestrator.util import get_yaml
-from stack_orchestrator.deploy.deploy_types import DeployCommandContext
-from stack_orchestrator.deploy.deployment_context import DeploymentContext
-from stack_orchestrator.deploy.stack_state import State
-from stack_orchestrator.deploy.deploy_util import VolumeMapping, run_container_command
 from pathlib import Path

+from stack_orchestrator.deploy.deploy_types import DeployCommandContext
+from stack_orchestrator.deploy.deploy_util import VolumeMapping, run_container_command
+from stack_orchestrator.deploy.deployment_context import DeploymentContext
+from stack_orchestrator.deploy.stack_state import State
+from stack_orchestrator.util import get_yaml
+
 default_spec_file_content = """config:
-    test_variable_1: test-value-1
+    test-variable-1: test-value-1
 """


@@ -7,5 +7,3 @@ containers:
  - cerc/test-container
 pods:
  - test
-jobs:
-  - test-job
@@ -14,12 +14,13 @@
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

 from pathlib import Path
-from typing import Optional
+
 from python_on_whales import DockerClient, DockerException
+
 from stack_orchestrator.deploy.deployer import (
    Deployer,
-    DeployerException,
    DeployerConfigGenerator,
+    DeployerException,
 )
 from stack_orchestrator.deploy.deployment_context import DeploymentContext
 from stack_orchestrator.opts import opts
@@ -32,10 +33,10 @@ class DockerDeployer(Deployer):
    def __init__(
        self,
        type: str,
-        deployment_context: Optional[DeploymentContext],
+        deployment_context: DeploymentContext | None,
        compose_files: list,
-        compose_project_name: Optional[str],
-        compose_env_file: Optional[str],
+        compose_project_name: str | None,
+        compose_env_file: str | None,
    ) -> None:
        self.docker = DockerClient(
            compose_files=compose_files,
@@ -48,26 +49,26 @@ class DockerDeployer(Deployer):
        self.compose_project_name = compose_project_name
        self.compose_env_file = compose_env_file

-    def up(self, detach, skip_cluster_management, services, image_overrides=None):
+    def up(self, detach, skip_cluster_management, services):
        if not opts.o.dry_run:
            try:
                return self.docker.compose.up(detach=detach, services=services)
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

    def down(self, timeout, volumes, skip_cluster_management):
        if not opts.o.dry_run:
            try:
                return self.docker.compose.down(timeout=timeout, volumes=volumes)
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

-    def update(self):
+    def update_envs(self):
        if not opts.o.dry_run:
            try:
                return self.docker.compose.restart()
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

    def status(self):
        if not opts.o.dry_run:
@@ -75,23 +76,21 @@ class DockerDeployer(Deployer):
                for p in self.docker.compose.ps():
                    print(f"{p.name}\t{p.state.status}")
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

    def ps(self):
        if not opts.o.dry_run:
            try:
                return self.docker.compose.ps()
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

    def port(self, service, private_port):
        if not opts.o.dry_run:
            try:
-                return self.docker.compose.port(
-                    service=service, private_port=private_port
-                )
+                return self.docker.compose.port(service=service, private_port=private_port)
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

    def execute(self, service, command, tty, envs):
        if not opts.o.dry_run:
@@ -100,7 +99,7 @@ class DockerDeployer(Deployer):
                    service=service, command=command, tty=tty, envs=envs
                )
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

    def logs(self, services, tail, follow, stream):
        if not opts.o.dry_run:
@@ -109,7 +108,7 @@ class DockerDeployer(Deployer):
                    services=services, tail=tail, follow=follow, stream=stream
                )
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

    def run(
        self,
@@ -118,10 +117,14 @@ class DockerDeployer(Deployer):
        user=None,
        volumes=None,
        entrypoint=None,
-        env={},
-        ports=[],
+        env=None,
+        ports=None,
        detach=False,
    ):
+        if ports is None:
+            ports = []
+        if env is None:
+            env = {}
        if not opts.o.dry_run:
            try:
                return self.docker.run(
@@ -136,9 +139,9 @@ class DockerDeployer(Deployer):
                    publish_all=len(ports) == 0,
                )
            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e

-    def run_job(self, job_name: str, release_name: Optional[str] = None):
+    def run_job(self, job_name: str, release_name: str | None = None):
        # release_name is ignored for Docker deployments (only used for K8s/Helm)
        if not opts.o.dry_run:
            try:
@@ -155,9 +158,7 @@ class DockerDeployer(Deployer):
                )

                if not job_compose_file.exists():
-                    raise DeployerException(
-                        f"Job compose file not found: {job_compose_file}"
-                    )
+                    raise DeployerException(f"Job compose file not found: {job_compose_file}")

                if opts.o.verbose:
                    print(f"Running job from: {job_compose_file}")
@@ -175,7 +176,7 @@ class DockerDeployer(Deployer):
                return job_docker.compose.run(service=job_name, remove=True, tty=True)

            except DockerException as e:
-                raise DeployerException(e)
+                raise DeployerException(e) from e


 class DockerDeployerConfigGenerator(DeployerConfigGenerator):
@@ -15,37 +15,37 @@

 # Deploys the system components using a deployer (either docker-compose or k8s)

-import hashlib
 import copy
+import hashlib
 import os
+import subprocess
 import sys
 from dataclasses import dataclass
 from importlib import resources
-from typing import Optional
-import subprocess
-import click
 from pathlib import Path
+
+import click
+
 from stack_orchestrator import constants
-from stack_orchestrator.opts import opts
-from stack_orchestrator.util import (
-    get_stack_path,
-    include_exclude_check,
-    get_parsed_stack_config,
-    global_options2,
-    get_dev_root_path,
-    stack_is_in_deployment,
-    resolve_compose_file,
-    get_job_list,
-)
-from stack_orchestrator.deploy.deployer import DeployerException
-from stack_orchestrator.deploy.deployer_factory import getDeployer
 from stack_orchestrator.deploy.compose.deploy_docker import DockerDeployer
 from stack_orchestrator.deploy.deploy_types import ClusterContext, DeployCommandContext
+from stack_orchestrator.deploy.deployer import DeployerException
+from stack_orchestrator.deploy.deployer_factory import getDeployer
 from stack_orchestrator.deploy.deployment_context import DeploymentContext
 from stack_orchestrator.deploy.deployment_create import create as deployment_create
 from stack_orchestrator.deploy.deployment_create import init as deployment_init
 from stack_orchestrator.deploy.deployment_create import setup as deployment_setup
 from stack_orchestrator.deploy.k8s import k8s_command
+from stack_orchestrator.opts import opts
+from stack_orchestrator.util import (
+    get_dev_root_path,
+    get_parsed_stack_config,
+    get_stack_path,
+    global_options2,
+    include_exclude_check,
+    resolve_compose_file,
+    stack_is_in_deployment,
+)


@click.group()
@@ -53,9 +53,7 @@ from stack_orchestrator.deploy.k8s import k8s_command
@click.option("--exclude", help="don't start these components")
@click.option("--env-file", help="env file to be used")
@click.option("--cluster", help="specify a non-default cluster name")
-@click.option(
-    "--deploy-to", help="cluster system to deploy to (compose or k8s or k8s-kind)"
-)
+@click.option("--deploy-to", help="cluster system to deploy to (compose or k8s or k8s-kind)")
@click.pass_context
 def command(ctx, include, exclude, env_file, cluster, deploy_to):
    """deploy a stack"""
@@ -94,7 +92,7 @@ def command(ctx, include, exclude, env_file, cluster, deploy_to):

 def create_deploy_context(
    global_context,
-    deployment_context: Optional[DeploymentContext],
+    deployment_context: DeploymentContext | None,
    stack,
    include,
    exclude,
@@ -117,9 +115,7 @@ def create_deploy_context(

    # For helm chart deployments, skip compose file loading
    if is_helm_chart_deployment:
-        cluster_context = ClusterContext(
-            global_context, cluster, [], [], [], None, env_file
-        )
+        cluster_context = ClusterContext(global_context, cluster, [], [], [], None, env_file)
    else:
        cluster_context = _make_cluster_context(
            global_context, stack, include, exclude, cluster, env_file
@@ -131,18 +127,11 @@ def create_deploy_context(
        compose_files=cluster_context.compose_files,
        compose_project_name=cluster_context.cluster,
        compose_env_file=cluster_context.env_file,
-        job_compose_files=cluster_context.job_compose_files,
    )
    return DeployCommandContext(stack, cluster_context, deployer)


-def up_operation(
-    ctx,
-    services_list,
-    stay_attached=False,
-    skip_cluster_management=False,
-    image_overrides=None,
-):
+def up_operation(ctx, services_list, stay_attached=False, skip_cluster_management=False):
    global_context = ctx.parent.parent.obj
    deploy_context = ctx.obj
    cluster_context = deploy_context.cluster_context
@@ -160,7 +149,6 @@ def up_operation(
        detach=not stay_attached,
        skip_cluster_management=skip_cluster_management,
        services=services_list,
-        image_overrides=image_overrides,
    )
    for post_start_command in cluster_context.post_start_commands:
        _run_command(global_context, cluster_context.cluster, post_start_command)
@@ -189,8 +177,14 @@ def status_operation(ctx):
    ctx.obj.deployer.status()


-def update_operation(ctx):
-    ctx.obj.deployer.update()
+def prepare_operation(ctx, skip_cluster_management=False):
+    ctx.obj.deployer.prepare(
+        skip_cluster_management=skip_cluster_management,
+    )
+
+
+def update_envs_operation(ctx):
+    ctx.obj.deployer.update_envs()


 def ps_operation(ctx):
@@ -210,8 +204,7 @@ def ps_operation(ctx):
                        print(f"{port_mapping}", end="")
                    else:
                        print(
-                            f"{mapping[0]['HostIp']}:{mapping[0]['HostPort']}"
-                            f"->{port_mapping}",
+                            f"{mapping[0]['HostIp']}:{mapping[0]['HostPort']}" f"->{port_mapping}",
                            end="",
                        )
                    comma = ", "
@@ -261,11 +254,11 @@ def logs_operation(ctx, tail: int, follow: bool, extra_args: str):
    logs_stream = ctx.obj.deployer.logs(
        services=services_list, tail=tail, follow=follow, stream=True
    )
-    for stream_type, stream_content in logs_stream:
+    for _stream_type, stream_content in logs_stream:
        print(stream_content.decode("utf-8"), end="")


-def run_job_operation(ctx, job_name: str, helm_release: Optional[str] = None):
+def run_job_operation(ctx, job_name: str, helm_release: str | None = None):
    global_context = ctx.parent.parent.obj
    if not global_context.dry_run:
        print(f"Running job: {job_name}")
@@ -285,9 +278,7 @@ def up(ctx, extra_args):


@command.command()
-@click.option(
-    "--delete-volumes/--preserve-volumes", default=False, help="delete data volumes"
-)
+@click.option("--delete-volumes/--preserve-volumes", default=False, help="delete data volumes")
@click.argument("extra_args", nargs=-1)  # help: command: down<service1> <service2>
@click.pass_context
 def down(ctx, delete_volumes, extra_args):
@@ -387,14 +378,10 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
    else:
        # See:
        # https://stackoverflow.com/questions/25389095/python-get-path-of-root-project-structure
-        compose_dir = (
-            Path(__file__).absolute().parent.parent.joinpath("data", "compose")
-        )
+        compose_dir = Path(__file__).absolute().parent.parent.joinpath("data", "compose")

    if cluster is None:
-        cluster = _make_default_cluster_name(
-            deployment, compose_dir, stack, include, exclude
-        )
+        cluster = _make_default_cluster_name(deployment, compose_dir, stack, include, exclude)
    else:
        _make_default_cluster_name(deployment, compose_dir, stack, include, exclude)

@@ -410,10 +397,8 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
        stack_config = get_parsed_stack_config(stack)
        if stack_config is not None:
            # TODO: syntax check the input here
-            pods_in_scope = stack_config.get("pods") or []
-            cluster_config = (
-                stack_config["config"] if "config" in stack_config else None
-            )
+            pods_in_scope = stack_config["pods"]
+            cluster_config = stack_config["config"] if "config" in stack_config else None
    else:
        pods_in_scope = all_pods

@@ -435,43 +420,29 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
        if include_exclude_check(pod_name, include, exclude):
            if pod_repository is None or pod_repository == "internal":
                if deployment:
-                    compose_file_name = os.path.join(
-                        compose_dir, f"docker-compose-{pod_path}.yml"
-                    )
+                    compose_file_name = os.path.join(compose_dir, f"docker-compose-{pod_path}.yml")
                else:
                    compose_file_name = resolve_compose_file(stack, pod_name)
            else:
                if deployment:
-                    compose_file_name = os.path.join(
-                        compose_dir, f"docker-compose-{pod_name}.yml"
-                    )
+                    compose_file_name = os.path.join(compose_dir, f"docker-compose-{pod_name}.yml")
                    pod_pre_start_command = pod.get("pre_start_command")
                    pod_post_start_command = pod.get("post_start_command")
-                    script_dir = compose_dir.parent.joinpath(
-                        "pods", pod_name, "scripts"
-                    )
+                    script_dir = compose_dir.parent.joinpath("pods", pod_name, "scripts")
                    if pod_pre_start_command is not None:
-                        pre_start_commands.append(
-                            os.path.join(script_dir, pod_pre_start_command)
-                        )
+                        pre_start_commands.append(os.path.join(script_dir, pod_pre_start_command))
                    if pod_post_start_command is not None:
-                        post_start_commands.append(
-                            os.path.join(script_dir, pod_post_start_command)
-                        )
+                        post_start_commands.append(os.path.join(script_dir, pod_post_start_command))
                else:
                    # TODO: fix this code for external stack with scripts
                    pod_root_dir = os.path.join(
                        dev_root_path, pod_repository.split("/")[-1], pod["path"]
                    )
-                    compose_file_name = os.path.join(
-                        pod_root_dir, f"docker-compose-{pod_name}.yml"
-                    )
+                    compose_file_name = os.path.join(pod_root_dir, f"docker-compose-{pod_name}.yml")
                    pod_pre_start_command = pod.get("pre_start_command")
                    pod_post_start_command = pod.get("post_start_command")
                    if pod_pre_start_command is not None:
-                        pre_start_commands.append(
-                            os.path.join(pod_root_dir, pod_pre_start_command)
-                        )
+                        pre_start_commands.append(os.path.join(pod_root_dir, pod_pre_start_command))
                    if pod_post_start_command is not None:
                        post_start_commands.append(
                            os.path.join(pod_root_dir, pod_post_start_command)
@@ -484,22 +455,6 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
    if ctx.verbose:
        print(f"files: {compose_files}")

-    # Gather job compose files (from compose-jobs/ directory in deployment)
-    job_compose_files = []
-    if deployment and stack:
-        stack_config = get_parsed_stack_config(stack)
-        if stack_config:
-            jobs = get_job_list(stack_config)
-            compose_jobs_dir = stack.joinpath("compose-jobs")
-            for job in jobs:
-                job_file_name = os.path.join(
-                    compose_jobs_dir, f"docker-compose-{job}.yml"
-                )
-                if os.path.exists(job_file_name):
-                    job_compose_files.append(job_file_name)
-            if ctx.verbose:
-                print(f"job files: {job_compose_files}")
-
    return ClusterContext(
        ctx,
        cluster,
@@ -508,7 +463,6 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
        post_start_commands,
        cluster_config,
        env_file,
-        job_compose_files=job_compose_files if job_compose_files else None,
    )


@@ -532,9 +486,7 @@ def _run_command(ctx, cluster_name, command):
    command_env["CERC_SO_COMPOSE_PROJECT"] = cluster_name
    if ctx.debug:
        command_env["CERC_SCRIPT_DEBUG"] = "true"
-    command_result = subprocess.run(
-        command_file, shell=True, env=command_env, cwd=command_dir
-    )
+    command_result = subprocess.run(command_file, shell=True, env=command_env, cwd=command_dir)
    if command_result.returncode != 0:
        print(f"FATAL Error running command: {command}")
        sys.exit(1)
@@ -591,9 +543,7 @@ def _orchestrate_cluster_config(ctx, cluster_config, deployer, container_exec_en
                        # "It returned with code 1"
                        if "It returned with code 1" in str(error):
                            if ctx.verbose:
-                                print(
-                                    "Config export script returned an error, re-trying"
-                                )
+                                print("Config export script returned an error, re-trying")
                        # If the script failed to execute
                        # (e.g. the file is not there) then we get:
                        # "It returned with code 2"
@@ -13,8 +13,9 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-from typing import List, Mapping, Optional
+from collections.abc import Mapping
 from dataclasses import dataclass
+
 from stack_orchestrator.command_types import CommandOptions
 from stack_orchestrator.deploy.deployer import Deployer

@@ -23,20 +24,19 @@ from stack_orchestrator.deploy.deployer import Deployer
 class ClusterContext:
    # TODO: this should be in its own object not stuffed in here
    options: CommandOptions
-    cluster: Optional[str]
-    compose_files: List[str]
-    pre_start_commands: List[str]
-    post_start_commands: List[str]
-    config: Optional[str]
-    env_file: Optional[str]
-    job_compose_files: Optional[List[str]] = None
+    cluster: str | None
+    compose_files: list[str]
+    pre_start_commands: list[str]
+    post_start_commands: list[str]
+    config: str | None
+    env_file: str | None


@dataclass
 class DeployCommandContext:
    stack: str
    cluster_context: ClusterContext
-    deployer: Optional[Deployer]
+    deployer: Deployer | None


@dataclass
@@ -13,15 +13,16 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-from typing import List, Any
+from typing import Any
+
 from stack_orchestrator.deploy.deploy_types import DeployCommandContext, VolumeMapping
+from stack_orchestrator.opts import opts
 from stack_orchestrator.util import (
    get_parsed_stack_config,
-    get_yaml,
    get_pod_list,
+    get_yaml,
    resolve_compose_file,
 )
-from stack_orchestrator.opts import opts


 def _container_image_from_service(stack: str, service: str):
@@ -32,7 +33,7 @@ def _container_image_from_service(stack: str, service: str):
    yaml = get_yaml()
    for pod in pods:
        pod_file_path = resolve_compose_file(stack, pod)
-        parsed_pod_file = yaml.load(open(pod_file_path, "r"))
+        parsed_pod_file = yaml.load(open(pod_file_path))
        if "services" in parsed_pod_file:
            services = parsed_pod_file["services"]
            if service in services:
@@ -45,7 +46,7 @@ def _container_image_from_service(stack: str, service: str):
 def parsed_pod_files_map_from_file_names(pod_files):
    parsed_pod_yaml_map: Any = {}
    for pod_file in pod_files:
-        with open(pod_file, "r") as pod_file_descriptor:
+        with open(pod_file) as pod_file_descriptor:
            parsed_pod_file = get_yaml().load(pod_file_descriptor)
            parsed_pod_yaml_map[pod_file] = parsed_pod_file
    if opts.o.debug:
@@ -53,7 +54,7 @@ def parsed_pod_files_map_from_file_names(pod_files):
    return parsed_pod_yaml_map


-def images_for_deployment(pod_files: List[str]):
+def images_for_deployment(pod_files: list[str]):
    image_set = set()
    parsed_pod_yaml_map = parsed_pod_files_map_from_file_names(pod_files)
    # Find the set of images in the pods
@@ -69,7 +70,7 @@ def images_for_deployment(pod_files: List[str]):
    return image_set


-def _volumes_to_docker(mounts: List[VolumeMapping]):
+def _volumes_to_docker(mounts: list[VolumeMapping]):
    # Example from doc: [("/", "/host"), ("/etc/hosts", "/etc/hosts", "rw")]
    result = []
    for mount in mounts:
@@ -79,7 +80,7 @@ def _volumes_to_docker(mounts: List[VolumeMapping]):


 def run_container_command(
-    ctx: DeployCommandContext, service: str, command: str, mounts: List[VolumeMapping]
+    ctx: DeployCommandContext, service: str, command: str, mounts: list[VolumeMapping]
 ):
    deployer = ctx.deployer
    if deployer is None:
@@ -15,12 +15,11 @@

 from abc import ABC, abstractmethod
 from pathlib import Path
-from typing import Optional


 class Deployer(ABC):
    @abstractmethod
-    def up(self, detach, skip_cluster_management, services, image_overrides=None):
+    def up(self, detach, skip_cluster_management, services):
        pass

    @abstractmethod
@@ -28,7 +27,7 @@ class Deployer(ABC):
        pass

    @abstractmethod
-    def update(self):
+    def update_envs(self):
        pass

    @abstractmethod
@@ -59,16 +58,23 @@ class Deployer(ABC):
        user=None,
        volumes=None,
        entrypoint=None,
-        env={},
-        ports=[],
+        env=None,
+        ports=None,
        detach=False,
    ):
        pass

    @abstractmethod
-    def run_job(self, job_name: str, release_name: Optional[str] = None):
+    def run_job(self, job_name: str, release_name: str | None = None):
        pass

+    def prepare(self, skip_cluster_management):
+        """Create cluster infrastructure (namespace, PVs, services) without starting pods.
+
+        Only supported for k8s deployers. Compose deployers raise an error.
+        """
+        raise DeployerException("prepare is only supported for k8s deployments")
+

 class DeployerException(Exception):
    def __init__(self, *args: object) -> None:
@@ -14,14 +14,14 @@
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

 from stack_orchestrator import constants
-from stack_orchestrator.deploy.k8s.deploy_k8s import (
-    K8sDeployer,
-    K8sDeployerConfigGenerator,
-)
 from stack_orchestrator.deploy.compose.deploy_docker import (
    DockerDeployer,
    DockerDeployerConfigGenerator,
 )
+from stack_orchestrator.deploy.k8s.deploy_k8s import (
+    K8sDeployer,
+    K8sDeployerConfigGenerator,
+)


 def getDeployerConfigGenerator(type: str, deployment_context):
@@ -34,12 +34,7 @@ def getDeployerConfigGenerator(type: str, deployment_context):


 def getDeployer(
-    type: str,
-    deployment_context,
-    compose_files,
-    compose_project_name,
-    compose_env_file,
-    job_compose_files=None,
+    type: str, deployment_context, compose_files, compose_project_name, compose_env_file
 ):
    if type == "compose" or type is None:
        return DockerDeployer(
@@ -49,17 +44,13 @@ def getDeployer(
            compose_project_name,
            compose_env_file,
        )
-    elif (
-        type == type == constants.k8s_deploy_type
-        or type == constants.k8s_kind_deploy_type
-    ):
+    elif type == type == constants.k8s_deploy_type or type == constants.k8s_kind_deploy_type:
        return K8sDeployer(
            type,
            deployment_context,
            compose_files,
            compose_project_name,
            compose_env_file,
-            job_compose_files=job_compose_files,
        )
    else:
        print(f"ERROR: deploy-to {type} is not valid")
@@ -13,28 +13,28 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-import click
-from pathlib import Path
 import subprocess
 import sys
+from pathlib import Path
+
+import click

 from stack_orchestrator import constants
-from stack_orchestrator.deploy.images import push_images_operation
 from stack_orchestrator.deploy.deploy import (
-    up_operation,
+    create_deploy_context,
    down_operation,
-    ps_operation,
-    port_operation,
-    status_operation,
-)
-from stack_orchestrator.deploy.deploy import (
    exec_operation,
    logs_operation,
-    create_deploy_context,
-    update_operation,
+    port_operation,
+    prepare_operation,
+    ps_operation,
+    status_operation,
+    up_operation,
+    update_envs_operation,
 )
 from stack_orchestrator.deploy.deploy_types import DeployCommandContext
 from stack_orchestrator.deploy.deployment_context import DeploymentContext
+from stack_orchestrator.deploy.images import push_images_operation


@click.group()
@@ -114,7 +114,7 @@ def up(ctx, stay_attached, skip_cluster_management, extra_args):
 )
@click.option(
    "--skip-cluster-management/--perform-cluster-management",
-    default=False,
+    default=True,
    help="Skip cluster initialization/tear-down (only for kind-k8s deployments)",
 )
@click.argument("extra_args", nargs=-1)  # help: command: up <service1> <service2>
@@ -125,14 +125,33 @@ def start(ctx, stay_attached, skip_cluster_management, extra_args):
    up_operation(ctx, services_list, stay_attached, skip_cluster_management)


-# TODO: remove legacy up command since it's an alias for stop
@command.command()
-@click.option(
-    "--delete-volumes/--preserve-volumes", default=False, help="delete data volumes"
-)
@click.option(
    "--skip-cluster-management/--perform-cluster-management",
    default=False,
+    help="Skip cluster initialization (only for kind-k8s deployments)",
+)
+@click.pass_context
+def prepare(ctx, skip_cluster_management):
+    """Create cluster infrastructure without starting pods.
+
+    Sets up the kind cluster, namespace, PVs, PVCs, ConfigMaps, Services,
+    and Ingresses — everything that 'start' does EXCEPT creating the
+    Deployment resource. No pods will be scheduled.
+
+    Use 'start --skip-cluster-management' afterward to create the Deployment
+    and start pods when ready.
+    """
+    ctx.obj = make_deploy_context(ctx)
+    prepare_operation(ctx, skip_cluster_management)
+
+
+# TODO: remove legacy up command since it's an alias for stop
+@command.command()
+@click.option("--delete-volumes/--preserve-volumes", default=False, help="delete data volumes")
+@click.option(
+    "--skip-cluster-management/--perform-cluster-management",
+    default=True,
    help="Skip cluster initialization/tear-down (only for kind-k8s deployments)",
 )
@click.argument("extra_args", nargs=-1)  # help: command: down <service1> <service2>
@@ -146,12 +165,10 @@ def down(ctx, delete_volumes, skip_cluster_management, extra_args):

 # stop is the preferred alias for down
@command.command()
-@click.option(
-    "--delete-volumes/--preserve-volumes", default=False, help="delete data volumes"
-)
+@click.option("--delete-volumes/--preserve-volumes", default=False, help="delete data volumes")
@click.option(
    "--skip-cluster-management/--perform-cluster-management",
-    default=False,
+    default=True,
    help="Skip cluster initialization/tear-down (only for kind-k8s deployments)",
 )
@click.argument("extra_args", nargs=-1)  # help: command: down <service1> <service2>
@@ -210,11 +227,11 @@ def status(ctx):
    status_operation(ctx)


-@command.command()
+@command.command(name="update-envs")
@click.pass_context
-def update(ctx):
+def update_envs(ctx):
    ctx.obj = make_deploy_context(ctx)
-    update_operation(ctx)
+    update_envs_operation(ctx)


@command.command()
@@ -234,9 +251,7 @@ def run_job(ctx, job_name, helm_release):

@command.command()
@click.option("--stack-path", help="Path to stack git repo (overrides stored path)")
-@click.option(
-    "--spec-file", help="Path to GitOps spec.yml in repo (e.g., deployment/spec.yml)"
-)
+@click.option("--spec-file", help="Path to GitOps spec.yml in repo (e.g., deployment/spec.yml)")
@click.option("--config-file", help="Config file to pass to deploy init")
@click.option(
    "--force",
@@ -248,13 +263,8 @@ def run_job(ctx, job_name, helm_release):
    "--expected-ip",
    help="Expected IP for DNS verification (if different from egress)",
 )
-@click.option(
-    "--image",
-    multiple=True,
-    help="Override container image: container=image",
-)
@click.pass_context
-def restart(ctx, stack_path, spec_file, config_file, force, expected_ip, image):
+def restart(ctx, stack_path, spec_file, config_file, force, expected_ip):
    """Pull latest code and restart deployment using git-tracked spec.

    GitOps workflow:
@@ -275,44 +285,27 @@ def restart(ctx, stack_path, spec_file, config_file, force, expected_ip, image):
    commands.py on each restart. Use 'deploy init' only for initial
    spec generation, then customize and commit to your operator repo.
    """
-    from stack_orchestrator.util import get_yaml, get_parsed_deployment_spec
    from stack_orchestrator.deploy.deployment_create import create_operation
    from stack_orchestrator.deploy.dns_probe import verify_dns_via_probe
+    from stack_orchestrator.util import get_parsed_deployment_spec, get_yaml

    deployment_context: DeploymentContext = ctx.obj

-    # Parse --image flags into a dict of container_name -> image
-    image_overrides = {}
-    for entry in image:
-        if "=" not in entry:
-            raise click.BadParameter(
-                f"Invalid --image format '{entry}', expected container=image",
-                param_hint="'--image'",
-            )
-        container_name, image_ref = entry.split("=", 1)
-        image_overrides[container_name] = image_ref
-
    # Get current spec info (before git pull)
    current_spec = deployment_context.spec
    current_http_proxy = current_spec.get_http_proxy()
-    current_hostname = (
-        current_http_proxy[0]["host-name"] if current_http_proxy else None
-    )
+    current_hostname = current_http_proxy[0]["host-name"] if current_http_proxy else None

    # Resolve stack source path
    if stack_path:
        stack_source = Path(stack_path).resolve()
    else:
        # Try to get from deployment.yml
-        deployment_file = (
-            deployment_context.deployment_dir / constants.deployment_file_name
-        )
+        deployment_file = deployment_context.deployment_dir / constants.deployment_file_name
        deployment_data = get_yaml().load(open(deployment_file))
        stack_source_str = deployment_data.get("stack-source")
        if not stack_source_str:
-            print(
-                "Error: No stack-source in deployment.yml and --stack-path not provided"
-            )
+            print("Error: No stack-source in deployment.yml and --stack-path not provided")
            print("Use --stack-path to specify the stack git repository location")
            sys.exit(1)
        stack_source = Path(stack_source_str)
@@ -328,9 +321,7 @@ def restart(ctx, stack_path, spec_file, config_file, force, expected_ip, image):

    # Step 1: Git pull (brings in updated spec.yml from operator's repo)
    print("\n[1/4] Pulling latest code from stack repository...")
-    git_result = subprocess.run(
-        ["git", "pull"], cwd=stack_source, capture_output=True, text=True
-    )
+    git_result = subprocess.run(["git", "pull"], cwd=stack_source, capture_output=True, text=True)
    if git_result.returncode != 0:
        print(f"Git pull failed: {git_result.stderr}")
        sys.exit(1)
@@ -338,22 +329,9 @@ def restart(ctx, stack_path, spec_file, config_file, force, expected_ip, image):

    # Determine spec file location
    # Priority: --spec-file argument > repo's deployment/spec.yml > deployment dir
-    # Find repo root via git rather than assuming a fixed directory depth.
-    git_root_result = subprocess.run(
-        ["git", "rev-parse", "--show-toplevel"],
-        cwd=stack_source,
-        capture_output=True,
-        text=True,
-    )
-    if git_root_result.returncode == 0:
-        repo_root = Path(git_root_result.stdout.strip())
-    else:
-        # Fallback: walk up from stack_source looking for .git
-        repo_root = stack_source
-        while repo_root != repo_root.parent:
-            if (repo_root / ".git").exists():
-                break
-            repo_root = repo_root.parent
+    # Stack path is like: repo/stack_orchestrator/data/stacks/stack-name
+    # So repo root is 4 parents up
+    repo_root = stack_source.parent.parent.parent.parent
    if spec_file:
        # Spec file relative to repo root
        spec_file_path = repo_root / spec_file
@@ -397,14 +375,7 @@ def restart(ctx, stack_path, spec_file, config_file, force, expected_ip, image):
        print("\n[2/4] Hostname unchanged, skipping DNS verification")

    # Step 3: Sync deployment directory with spec
-    # The spec's "stack:" value is often a relative path (e.g.
-    # "stack-orchestrator/stacks/dumpster") that must resolve from the
-    # repo root.  Change cwd so stack_is_external() sees it correctly.
    print("\n[3/4] Syncing deployment directory...")
-    import os
-
-    prev_cwd = os.getcwd()
-    os.chdir(repo_root)
    deploy_ctx = make_deploy_context(ctx)
    create_operation(
        deployment_command_context=deploy_ctx,
@@ -414,216 +385,24 @@ def restart(ctx, stack_path, spec_file, config_file, force, expected_ip, image):
        network_dir=None,
        initial_peers=None,
    )
+
    # Reload deployment context with updated spec
    deployment_context.init(deployment_context.deployment_dir)
    ctx.obj = deployment_context

-    # Apply updated deployment.
-    # If maintenance-service is configured, swap Ingress to maintenance
-    # backend during the Recreate window so users see a branded page
-    # instead of bare 502s.
-    print("\n[4/4] Applying deployment update...")
+    # Stop deployment
+    print("\n[4/4] Restarting deployment...")
    ctx.obj = make_deploy_context(ctx)
+    down_operation(ctx, delete_volumes=False, extra_args_list=[], skip_cluster_management=True)

-    # Check for maintenance service in the (reloaded) spec
-    maintenance_svc = deployment_context.spec.get_maintenance_service()
-    if maintenance_svc:
-        print(f"Maintenance service configured: {maintenance_svc}")
-        _restart_with_maintenance(
-            ctx, deployment_context, maintenance_svc, image_overrides
-        )
-    else:
-        up_operation(
-            ctx,
-            services_list=None,
-            stay_attached=False,
-            skip_cluster_management=True,
-            image_overrides=image_overrides or None,
-        )
+    # Namespace deletion wait is handled by _ensure_namespace() in
+    # the deployer — no fixed sleep needed here.

-    # Restore cwd after both create_operation and up_operation have run.
-    # Both need the relative stack path to resolve from repo_root.
-    os.chdir(prev_cwd)
+    # Start deployment
+    up_operation(ctx, services_list=None, stay_attached=False, skip_cluster_management=True)

    print("\n=== Restart Complete ===")
-    print("Deployment updated via rolling update.")
+    print("Deployment restarted with git-tracked configuration.")
    if new_hostname and new_hostname != current_hostname:
        print(f"\nNew hostname: {new_hostname}")
        print("Caddy will automatically provision TLS certificate.")
-
-
-def _restart_with_maintenance(
-    ctx, deployment_context, maintenance_svc, image_overrides
-):
-    """Restart with Ingress swap to maintenance service during Recreate.
-
-    Flow:
-    1. Deploy all pods (including maintenance pod) with up_operation
-    2. Patch Ingress: swap all route backends to maintenance service
-    3. Scale main (non-maintenance) Deployments to 0
-    4. Scale main Deployments back up (triggers Recreate with new spec)
-    5. Wait for readiness
-    6. Patch Ingress: restore original backends
-
-    This ensures the maintenance pod is already running before we touch
-    the Ingress, and the main pods get a clean Recreate.
-    """
-    import time
-
-    from kubernetes.client.exceptions import ApiException
-
-    from stack_orchestrator.deploy.deploy import up_operation
-
-    # Step 1: Apply the full deployment (creates/updates all pods + services)
-    # This ensures maintenance pod exists before we swap Ingress to it.
-    up_operation(
-        ctx,
-        services_list=None,
-        stay_attached=False,
-        skip_cluster_management=True,
-        image_overrides=image_overrides or None,
-    )
-
-    # Parse maintenance service spec: "container-name:port"
-    maint_container = maintenance_svc.split(":")[0]
-    maint_port = int(maintenance_svc.split(":")[1])
-
-    # Connect to k8s API
-    deploy_ctx = ctx.obj
-    deployer = deploy_ctx.deployer
-    deployer.connect_api()
-    namespace = deployer.k8s_namespace
-    app_name = deployer.cluster_info.app_name
-    networking_api = deployer.networking_api
-    apps_api = deployer.apps_api
-
-    ingress_name = f"{app_name}-ingress"
-
-    # Step 2: Read current Ingress and save original backends
-    try:
-        ingress = networking_api.read_namespaced_ingress(
-            name=ingress_name, namespace=namespace
-        )
-    except ApiException:
-        print("Warning: No Ingress found, skipping maintenance swap")
-        return
-
-    # Resolve which service the maintenance container belongs to
-    maint_service_name = deployer.cluster_info._resolve_service_name_for_container(
-        maint_container
-    )
-
-    # Save original backends for restoration
-    original_backends = []
-    for rule in ingress.spec.rules:
-        rule_backends = []
-        for path in rule.http.paths:
-            rule_backends.append(
-                {
-                    "name": path.backend.service.name,
-                    "port": path.backend.service.port.number,
-                }
-            )
-        original_backends.append(rule_backends)
-
-    # Patch all Ingress backends to point to maintenance service
-    print("Swapping Ingress to maintenance service...")
-    for rule in ingress.spec.rules:
-        for path in rule.http.paths:
-            path.backend.service.name = maint_service_name
-            path.backend.service.port.number = maint_port
-
-    networking_api.replace_namespaced_ingress(
-        name=ingress_name, namespace=namespace, body=ingress
-    )
-    print("Ingress now points to maintenance service")
-
-    # Step 3: Find main (non-maintenance) Deployments and scale to 0
-    # then back up to trigger a clean Recreate
-    deployments_resp = apps_api.list_namespaced_deployment(
-        namespace=namespace, label_selector=f"app={app_name}"
-    )
-    main_deployments = []
-    for dep in deployments_resp.items:
-        dep_name = dep.metadata.name
-        # Skip maintenance deployments
-        component = (dep.metadata.labels or {}).get("app.kubernetes.io/component", "")
-        is_maintenance = maint_container in component
-        if not is_maintenance:
-            main_deployments.append(dep_name)
-
-    if main_deployments:
-        # Scale down main deployments
-        for dep_name in main_deployments:
-            print(f"Scaling down {dep_name}...")
-            apps_api.patch_namespaced_deployment_scale(
-                name=dep_name,
-                namespace=namespace,
-                body={"spec": {"replicas": 0}},
-            )
-
-        # Wait for pods to terminate
-        print("Waiting for main pods to terminate...")
-        deadline = time.monotonic() + 120
-        while time.monotonic() < deadline:
-            pods = deployer.core_api.list_namespaced_pod(
-                namespace=namespace,
-                label_selector=f"app={app_name}",
-            )
-            # Count non-maintenance pods
-            active = sum(
-                1
-                for p in pods.items
-                if p.metadata
-                and p.metadata.deletion_timestamp is None
-                and not any(
-                    maint_container in (c.name or "") for c in (p.spec.containers or [])
-                )
-            )
-            if active == 0:
-                break
-            time.sleep(2)
-
-        # Scale back up
-        replicas = deployment_context.spec.get_replicas()
-        for dep_name in main_deployments:
-            print(f"Scaling up {dep_name} to {replicas} replicas...")
-            apps_api.patch_namespaced_deployment_scale(
-                name=dep_name,
-                namespace=namespace,
-                body={"spec": {"replicas": replicas}},
-            )
-
-        # Step 5: Wait for readiness
-        print("Waiting for main pods to become ready...")
-        deadline = time.monotonic() + 300
-        while time.monotonic() < deadline:
-            all_ready = True
-            for dep_name in main_deployments:
-                dep = apps_api.read_namespaced_deployment(
-                    name=dep_name, namespace=namespace
-                )
-                ready = dep.status.ready_replicas or 0
-                desired = dep.spec.replicas or 1
-                if ready < desired:
-                    all_ready = False
-                    break
-            if all_ready:
-                break
-            time.sleep(5)
-
-    # Step 6: Restore original Ingress backends
-    print("Restoring original Ingress backends...")
-    ingress = networking_api.read_namespaced_ingress(
-        name=ingress_name, namespace=namespace
-    )
-    for i, rule in enumerate(ingress.spec.rules):
-        for j, path in enumerate(rule.http.paths):
-            if i < len(original_backends) and j < len(original_backends[i]):
-                path.backend.service.name = original_backends[i][j]["name"]
-                path.backend.service.port.number = original_backends[i][j]["port"]
-
-    networking_api.replace_namespaced_ingress(
-        name=ingress_name, namespace=namespace, body=ingress
-    )
-    print("Ingress restored to original backends")
@@ -18,9 +18,9 @@ import os
 from pathlib import Path

 from stack_orchestrator import constants
-from stack_orchestrator.util import get_yaml
-from stack_orchestrator.deploy.stack import Stack
 from stack_orchestrator.deploy.spec import Spec
+from stack_orchestrator.deploy.stack import Stack
+from stack_orchestrator.util import get_yaml


 class DeploymentContext:
@@ -58,7 +58,7 @@ class DeploymentContext:
        self.stack.init_from_file(self.get_stack_file())
        deployment_file_path = self.get_deployment_file()
        if deployment_file_path.exists():
-            obj = get_yaml().load(open(deployment_file_path, "r"))
+            obj = get_yaml().load(open(deployment_file_path))
            self.id = obj[constants.cluster_id_key]
        # Handle the case of a legacy deployment with no file
        # Code below is intended to match the output from _make_default_cluster_name()
@@ -75,7 +75,7 @@ class DeploymentContext:
            raise ValueError(f"File is not inside deployment directory: {file_path}")

        yaml = get_yaml()
-        with open(file_path, "r") as f:
+        with open(file_path) as f:
            yaml_data = yaml.load(f)

        modifier_func(yaml_data)
@@ -13,44 +13,44 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-import click
-from importlib import util
+import base64
+import filecmp
 import json
 import os
-import re
-import base64
-from pathlib import Path
-from typing import List, Optional
 import random
-from shutil import copy, copyfile, copytree, rmtree
-from secrets import token_hex
+import re
 import sys
-import filecmp
 import tempfile
+from importlib import util
+from pathlib import Path
+from secrets import token_hex
+from shutil import copy, copyfile, copytree, rmtree
+
+import click

 from stack_orchestrator import constants
-from stack_orchestrator.opts import opts
-from stack_orchestrator.util import (
-    get_stack_path,
-    get_parsed_deployment_spec,
-    get_parsed_stack_config,
-    global_options,
-    get_yaml,
-    get_pod_list,
-    get_pod_file_path,
-    pod_has_scripts,
-    get_pod_script_paths,
-    get_plugin_code_paths,
-    error_exit,
-    env_var_map_from_file,
-    resolve_config_dir,
-    get_job_list,
-    get_job_file_path,
-)
-from stack_orchestrator.deploy.spec import Spec
 from stack_orchestrator.deploy.deploy_types import LaconicStackSetupCommand
 from stack_orchestrator.deploy.deployer_factory import getDeployerConfigGenerator
 from stack_orchestrator.deploy.deployment_context import DeploymentContext
+from stack_orchestrator.deploy.spec import Spec
+from stack_orchestrator.opts import opts
+from stack_orchestrator.util import (
+    env_var_map_from_file,
+    error_exit,
+    get_job_file_path,
+    get_job_list,
+    get_parsed_deployment_spec,
+    get_parsed_stack_config,
+    get_plugin_code_paths,
+    get_pod_file_path,
+    get_pod_list,
+    get_pod_script_paths,
+    get_stack_path,
+    get_yaml,
+    global_options,
+    pod_has_scripts,
+    resolve_config_dir,
+)


 def _make_default_deployment_dir():
@@ -66,7 +66,7 @@ def _get_ports(stack):
        pod_file_path = get_pod_file_path(stack, parsed_stack, pod)
        if pod_file_path is None:
            continue
-        parsed_pod_file = yaml.load(open(pod_file_path, "r"))
+        parsed_pod_file = yaml.load(open(pod_file_path))
        if "services" in parsed_pod_file:
            for svc_name, svc in parsed_pod_file["services"].items():
                if "ports" in svc:
@@ -102,7 +102,7 @@ def _get_named_volumes(stack):
        pod_file_path = get_pod_file_path(stack, parsed_stack, pod)
        if pod_file_path is None:
            continue
-        parsed_pod_file = yaml.load(open(pod_file_path, "r"))
+        parsed_pod_file = yaml.load(open(pod_file_path))
        if "volumes" in parsed_pod_file:
            volumes = parsed_pod_file["volumes"]
            for volume in volumes.keys():
@@ -132,9 +132,7 @@ def _create_bind_dir_if_relative(volume, path_string, compose_dir):
        absolute_path.mkdir(parents=True, exist_ok=True)
    else:
        if not path.exists():
-            print(
-                f"WARNING: mount path for volume {volume} does not exist: {path_string}"
-            )
+            print(f"WARNING: mount path for volume {volume} does not exist: {path_string}")


 # See:
@@ -151,9 +149,7 @@ def _fixup_pod_file(pod, spec, compose_dir):
                    volume_spec = spec_volumes[volume]
                    if volume_spec:
                        volume_spec_fixedup = (
-                            volume_spec
-                            if Path(volume_spec).is_absolute()
-                            else f".{volume_spec}"
+                            volume_spec if Path(volume_spec).is_absolute() else f".{volume_spec}"
                        )
                        _create_bind_dir_if_relative(volume, volume_spec, compose_dir)
                        # this is Docker specific
@@ -265,25 +261,6 @@ def call_stack_deploy_create(deployment_context, extra_args):
                imported_stack.create(deployment_context, extra_args)


-def call_stack_deploy_start(deployment_context):
-    """Call start() hooks after k8s deployments and jobs are created.
-
-    The start() hook receives the DeploymentContext, allowing stacks to
-    create additional k8s resources (Services, etc.) in the deployment namespace.
-    The namespace can be derived as f"laconic-{deployment_context.id}".
-    """
-    python_file_paths = _commands_plugin_paths(deployment_context.stack.name)
-    for python_file_path in python_file_paths:
-        if python_file_path.exists():
-            spec = util.spec_from_file_location("commands", python_file_path)
-            if spec is None or spec.loader is None:
-                continue
-            imported_stack = util.module_from_spec(spec)
-            spec.loader.exec_module(imported_stack)
-            if _has_method(imported_stack, "start"):
-                imported_stack.start(deployment_context)
-
-
 # Inspect the pod yaml to find config files referenced in subdirectories
 # other than the one associated with the pod
 def _find_extra_config_dirs(parsed_pod_file, pod):
@@ -347,10 +324,7 @@ def _get_mapped_ports(stack: str, map_recipe: str):
                        else:
                            print("Error: bad map_recipe")
            else:
-                print(
-                    f"Error: --map-ports-to-host must specify one of: "
-                    f"{port_map_recipes}"
-                )
+                print(f"Error: --map-ports-to-host must specify one of: " f"{port_map_recipes}")
                sys.exit(1)
    return ports

@@ -375,9 +349,7 @@ def _parse_config_variables(variable_values: str):

@click.command()
@click.option("--config", help="Provide config variables for the deployment")
-@click.option(
-    "--config-file", help="Provide config variables in a file for the deployment"
-)
+@click.option("--config-file", help="Provide config variables in a file for the deployment")
@click.option("--kube-config", help="Provide a config file for a k8s deployment")
@click.option(
    "--image-registry",
@@ -391,9 +363,7 @@ def _parse_config_variables(variable_values: str):
    "localhost-same, any-same, localhost-fixed-random, any-fixed-random",
 )
@click.pass_context
-def init(
-    ctx, config, config_file, kube_config, image_registry, output, map_ports_to_host
-):
+def init(ctx, config, config_file, kube_config, image_registry, output, map_ports_to_host):
    stack = global_options(ctx).stack
    deployer_type = ctx.obj.deployer.type
    deploy_command_context = ctx.obj
@@ -440,13 +410,9 @@ def init_operation(
    else:
        # Check for --kube-config supplied for non-relevant deployer types
        if kube_config is not None:
-            error_exit(
-                f"--kube-config is not allowed with a {deployer_type} deployment"
-            )
+            error_exit(f"--kube-config is not allowed with a {deployer_type} deployment")
        if image_registry is not None:
-            error_exit(
-                f"--image-registry is not allowed with a {deployer_type} deployment"
-            )
+            error_exit(f"--image-registry is not allowed with a {deployer_type} deployment")
    if default_spec_file_content:
        spec_file_content.update(default_spec_file_content)
    config_variables = _parse_config_variables(config)
@@ -496,14 +462,9 @@ def init_operation(
            spec_file_content["volumes"] = {**volume_descriptors, **orig_volumes}
        if configmap_descriptors:
            spec_file_content["configmaps"] = configmap_descriptors
-        if "k8s" in deployer_type:
-            if "secrets" not in spec_file_content:
-                spec_file_content["secrets"] = {}

    if opts.o.debug:
-        print(
-            f"Creating spec file for stack: {stack} with content: {spec_file_content}"
-        )
+        print(f"Creating spec file for stack: {stack} with content: {spec_file_content}")

    with open(output, "w") as output_file:
        get_yaml().dump(spec_file_content, output_file)
@@ -519,7 +480,8 @@ def _generate_and_store_secrets(config_vars: dict, deployment_name: str):
    Called by `deploy create` - generates fresh secrets and stores them.
    Returns the generated secrets dict for reference.
    """
-    from kubernetes import client, config as k8s_config
+    from kubernetes import client
+    from kubernetes import config as k8s_config

    secrets = {}
    for name, value in config_vars.items():
@@ -548,9 +510,7 @@ def _generate_and_store_secrets(config_vars: dict, deployment_name: str):
        try:
            k8s_config.load_incluster_config()
        except Exception:
-            print(
-                "Warning: Could not load kube config, secrets will not be stored in K8s"
-            )
+            print("Warning: Could not load kube config, secrets will not be stored in K8s")
            return secrets

    v1 = client.CoreV1Api()
@@ -577,9 +537,7 @@ def _generate_and_store_secrets(config_vars: dict, deployment_name: str):
    return secrets


-def create_registry_secret(
-    spec: Spec, deployment_name: str, namespace: str = "default"
-) -> Optional[str]:
+def create_registry_secret(spec: Spec, deployment_name: str) -> str | None:
    """Create K8s docker-registry secret from spec + environment.

    Reads registry configuration from spec.yml and creates a Kubernetes
@@ -588,12 +546,12 @@ def create_registry_secret(
    Args:
        spec: The deployment spec containing image-registry config
        deployment_name: Name of the deployment (used for secret naming)
-        namespace: K8s namespace to create the secret in

    Returns:
        The secret name if created, None if no registry config
    """
-    from kubernetes import client, config as k8s_config
+    from kubernetes import client
+    from kubernetes import config as k8s_config

    registry_config = spec.get_image_registry_config()
    if not registry_config:
@@ -602,41 +560,23 @@ def create_registry_secret(
    server = registry_config.get("server")
    username = registry_config.get("username")
    token_env = registry_config.get("token-env")
-    token_file = registry_config.get("token-file")

-    if not server or not username:
-        return None
-    if not token_env and not token_file:
+    if not all([server, username, token_env]):
        return None

-    # Resolve token: file takes precedence over env var
-    token = None
-    if token_file:
-        token_path = os.path.expanduser(token_file)
-        if os.path.exists(token_path):
-            with open(token_path) as f:
-                token = f.read().strip()
-        else:
-            print(f"Warning: Registry token file '{token_path}' not found")
-    if not token and token_env:
-        token = os.environ.get(token_env)
-
+    # Type narrowing for pyright - we've validated these aren't None above
+    assert token_env is not None
+    token = os.environ.get(token_env)
    if not token:
-        source = token_file or token_env
-        print(
-            f"Warning: Registry token not available from '{source}', "
-            "skipping registry secret"
-        )
+        print(f"Warning: Registry token env var '{token_env}' not set, " "skipping registry secret")
        return None

    # Create dockerconfigjson format (Docker API uses "password" field for tokens)
    auth = base64.b64encode(f"{username}:{token}".encode()).decode()
-    docker_config = {
-        "auths": {server: {"username": username, "password": token, "auth": auth}}
-    }
+    docker_config = {"auths": {server: {"username": username, "password": token, "auth": auth}}}

    # Secret name derived from deployment name
-    secret_name = f"{deployment_name}-image-pull-secret"
+    secret_name = f"{deployment_name}-registry"

    # Load kube config
    try:
@@ -649,14 +589,11 @@ def create_registry_secret(
            return None

    v1 = client.CoreV1Api()
+    namespace = "default"

    k8s_secret = client.V1Secret(
        metadata=client.V1ObjectMeta(name=secret_name),
-        data={
-            ".dockerconfigjson": base64.b64encode(
-                json.dumps(docker_config).encode()
-            ).decode()
-        },
+        data={".dockerconfigjson": base64.b64encode(json.dumps(docker_config).encode()).decode()},
        type="kubernetes.io/dockerconfigjson",
    )

@@ -673,32 +610,20 @@ def create_registry_secret(
    return secret_name


-def _write_config_file(
-    spec_file: Path, config_env_file: Path, deployment_name: Optional[str] = None
-):
+def _write_config_file(spec_file: Path, config_env_file: Path, deployment_name: str | None = None):
    spec_content = get_parsed_deployment_spec(spec_file)
    config_vars = spec_content.get("config", {}) or {}

    # Generate and store secrets in K8s if deployment_name provided and tokens exist
    if deployment_name and config_vars:
        has_generate_tokens = any(
-            isinstance(v, str) and GENERATE_TOKEN_PATTERN.search(v)
-            for v in config_vars.values()
+            isinstance(v, str) and GENERATE_TOKEN_PATTERN.search(v) for v in config_vars.values()
        )
        if has_generate_tokens:
            _generate_and_store_secrets(config_vars, deployment_name)

    # Write non-secret config to config.env (exclude $generate:...$ tokens)
    with open(config_env_file, "w") as output_file:
-        output_file.write(
-            "# AUTO-GENERATED by laconic-so from spec.yml config section.\n"
-            "# Source: stack_orchestrator/deploy/deployment_create.py"
-            " _write_config_file()\n"
-            "# Do not edit — changes will be overwritten on deploy create"
-            " or restart.\n"
-            "# To change config, edit the config section in your spec.yml"
-            " and redeploy.\n"
-        )
        if config_vars:
            for variable_name, variable_value in config_vars.items():
                # Skip variables with generate tokens - they go to K8s Secret
@@ -708,19 +633,6 @@ def _write_config_file(
                    continue
                output_file.write(f"{variable_name}={variable_value}\n")

-        # Append contents of credentials files listed in spec
-        credentials_files = spec_content.get("credentials-files", []) or []
-        for cred_path_str in credentials_files:
-            cred_path = Path(cred_path_str).expanduser()
-            if not cred_path.exists():
-                print(f"Error: credentials file does not exist: {cred_path}")
-                sys.exit(1)
-            output_file.write(f"# From credentials file: {cred_path_str}\n")
-            contents = cred_path.read_text()
-            output_file.write(contents)
-            if not contents.endswith("\n"):
-                output_file.write("\n")
-

 def _write_kube_config_file(external_path: Path, internal_path: Path):
    if not external_path.exists():
@@ -728,13 +640,13 @@ def _write_kube_config_file(external_path: Path, internal_path: Path):
    copyfile(external_path, internal_path)


-def _copy_files_to_directory(file_paths: List[Path], directory: Path):
+def _copy_files_to_directory(file_paths: list[Path], directory: Path):
    for path in file_paths:
        # Using copy to preserve the execute bit
        copy(path, os.path.join(directory, os.path.basename(path)))


-def _create_deployment_file(deployment_dir: Path, stack_source: Optional[Path] = None):
+def _create_deployment_file(deployment_dir: Path, stack_source: Path | None = None):
    deployment_file_path = deployment_dir.joinpath(constants.deployment_file_name)
    cluster = f"{constants.cluster_name_prefix}{token_hex(8)}"
    deployment_content = {constants.cluster_id_key: cluster}
@@ -760,9 +672,7 @@ def _check_volume_definitions(spec):


@click.command()
-@click.option(
-    "--spec-file", required=True, help="Spec file to use to create this deployment"
-)
+@click.option("--spec-file", required=True, help="Spec file to use to create this deployment")
@click.option("--deployment-dir", help="Create deployment files in this directory")
@click.option(
    "--update",
@@ -816,9 +726,7 @@ def create_operation(
    initial_peers=None,
    extra_args=(),
 ):
-    parsed_spec = Spec(
-        os.path.abspath(spec_file), get_parsed_deployment_spec(spec_file)
-    )
+    parsed_spec = Spec(os.path.abspath(spec_file), get_parsed_deployment_spec(spec_file))
    _check_volume_definitions(parsed_spec)
    stack_name = parsed_spec["stack"]
    deployment_type = parsed_spec[constants.deploy_to_key]
@@ -872,10 +780,10 @@ def create_operation(
            # Copy from temp to deployment dir, excluding data volumes
            # and backing up changed files.
            # Exclude data/* to avoid touching user data volumes.
-            exclude_patterns = ["data", "data/*"]
-            _safe_copy_tree(
-                temp_dir, deployment_dir_path, exclude_patterns=exclude_patterns
-            )
+            # Exclude config file to preserve deployment settings
+            # (XXX breaks passing config vars from spec)
+            exclude_patterns = ["data", "data/*", constants.config_file_name]
+            _safe_copy_tree(temp_dir, deployment_dir_path, exclude_patterns=exclude_patterns)
        finally:
            # Clean up temp dir
            rmtree(temp_dir)
@@ -898,18 +806,14 @@ def create_operation(
    deployment_context = DeploymentContext()
    deployment_context.init(deployment_dir_path)
    # Call the deployer to generate any deployer-specific files (e.g. for kind)
-    deployer_config_generator = getDeployerConfigGenerator(
-        deployment_type, deployment_context
-    )
+    deployer_config_generator = getDeployerConfigGenerator(deployment_type, deployment_context)
    # TODO: make deployment_dir_path a Path above
    if deployer_config_generator is not None:
        deployer_config_generator.generate(deployment_dir_path)
-    call_stack_deploy_create(
-        deployment_context, [network_dir, initial_peers, *extra_args]
-    )
+    call_stack_deploy_create(deployment_context, [network_dir, initial_peers, *extra_args])


-def _safe_copy_tree(src: Path, dst: Path, exclude_patterns: Optional[List[str]] = None):
+def _safe_copy_tree(src: Path, dst: Path, exclude_patterns: list[str] | None = None):
    """
    Recursively copy a directory tree, backing up changed files with .bak suffix.

@@ -930,11 +834,7 @@ def _safe_copy_tree(src: Path, dst: Path, exclude_patterns: Optional[List[str]]

    def safe_copy_file(src_file: Path, dst_file: Path):
        """Copy file, backing up destination if it differs."""
-        if (
-            dst_file.exists()
-            and not dst_file.is_dir()
-            and not filecmp.cmp(src_file, dst_file)
-        ):
+        if dst_file.exists() and not dst_file.is_dir() and not filecmp.cmp(src_file, dst_file):
            os.rename(dst_file, f"{dst_file}.bak")
        copy(src_file, dst_file)

@@ -960,7 +860,7 @@ def _write_deployment_files(
    stack_name: str,
    deployment_type: str,
    include_deployment_file: bool = True,
-    stack_source: Optional[Path] = None,
+    stack_source: Path | None = None,
 ):
    """
    Write deployment files to target directory.
@@ -988,9 +888,7 @@ def _write_deployment_files(
    # Use stack_name as deployment_name for K8s secret naming
    # Extract just the name part if stack_name is a path ("path/to/stack" -> "stack")
    deployment_name = Path(stack_name).name.replace("_", "-")
-    _write_config_file(
-        spec_file, target_dir.joinpath(constants.config_file_name), deployment_name
-    )
+    _write_config_file(spec_file, target_dir.joinpath(constants.config_file_name), deployment_name)

    # Copy any k8s config file into the target dir
    if deployment_type == "k8s":
@@ -1011,7 +909,7 @@ def _write_deployment_files(
        pod_file_path = get_pod_file_path(stack_name, parsed_stack, pod)
        if pod_file_path is None:
            continue
-        parsed_pod_file = yaml.load(open(pod_file_path, "r"))
+        parsed_pod_file = yaml.load(open(pod_file_path))
        extra_config_dirs = _find_extra_config_dirs(parsed_pod_file, pod)
        destination_pod_dir = destination_pods_dir.joinpath(pod)
        os.makedirs(destination_pod_dir, exist_ok=True)
@@ -1019,7 +917,7 @@ def _write_deployment_files(
            print(f"extra config dirs: {extra_config_dirs}")
        _fixup_pod_file(parsed_pod_file, parsed_spec, destination_compose_dir)
        with open(
-            destination_compose_dir.joinpath("docker-compose-%s.yml" % pod), "w"
+            destination_compose_dir.joinpath(f"docker-compose-{pod}.yml"), "w"
        ) as output_file:
            yaml.dump(parsed_pod_file, output_file)

@@ -1039,7 +937,13 @@ def _write_deployment_files(
            script_paths = get_pod_script_paths(parsed_stack, pod)
            _copy_files_to_directory(script_paths, destination_script_dir)

-        if not parsed_spec.is_kubernetes_deployment():
+        if parsed_spec.is_kubernetes_deployment():
+            for configmap in parsed_spec.get_configmaps():
+                source_config_dir = resolve_config_dir(stack_name, configmap)
+                if os.path.exists(source_config_dir):
+                    destination_config_dir = target_dir.joinpath("configmaps", configmap)
+                    copytree(source_config_dir, destination_config_dir, dirs_exist_ok=True)
+        else:
            # TODO:
            # This is odd - looks up config dir that matches a volume name,
            # then copies as a mount dir?
@@ -1061,29 +965,18 @@ def _write_deployment_files(
                            dirs_exist_ok=True,
                        )

-    # Copy configmap directories for k8s deployments (outside the pod loop
-    # so this works for jobs-only stacks too)
-    if parsed_spec.is_kubernetes_deployment():
-        for configmap in parsed_spec.get_configmaps():
-            source_config_dir = resolve_config_dir(stack_name, configmap)
-            if os.path.exists(source_config_dir):
-                destination_config_dir = target_dir.joinpath("configmaps", configmap)
-                copytree(source_config_dir, destination_config_dir, dirs_exist_ok=True)
-
-    # Copy the job files into the target dir
+    # Copy the job files into the target dir (for Docker deployments)
    jobs = get_job_list(parsed_stack)
-    if jobs:
+    if jobs and not parsed_spec.is_kubernetes_deployment():
        destination_compose_jobs_dir = target_dir.joinpath("compose-jobs")
        os.makedirs(destination_compose_jobs_dir, exist_ok=True)
        for job in jobs:
            job_file_path = get_job_file_path(stack_name, parsed_stack, job)
            if job_file_path and job_file_path.exists():
-                parsed_job_file = yaml.load(open(job_file_path, "r"))
+                parsed_job_file = yaml.load(open(job_file_path))
                _fixup_pod_file(parsed_job_file, parsed_spec, destination_compose_dir)
                with open(
-                    destination_compose_jobs_dir.joinpath(
-                        "docker-compose-%s.yml" % job
-                    ),
+                    destination_compose_jobs_dir.joinpath(f"docker-compose-{job}.yml"),
                    "w",
                ) as output_file:
                    yaml.dump(parsed_job_file, output_file)
@@ -1098,18 +991,14 @@ def _write_deployment_files(
@click.option("--node-moniker", help="Moniker for this node")
@click.option("--chain-id", help="The new chain id")
@click.option("--key-name", help="Name for new node key")
-@click.option(
-    "--gentx-files", help="List of comma-delimited gentx filenames from other nodes"
-)
+@click.option("--gentx-files", help="List of comma-delimited gentx filenames from other nodes")
@click.option(
    "--gentx-addresses",
    type=str,
    help="List of comma-delimited validator addresses for other nodes",
 )
@click.option("--genesis-file", help="Genesis file for the network")
-@click.option(
-    "--initialize-network", is_flag=True, default=False, help="Initialize phase"
-)
+@click.option("--initialize-network", is_flag=True, default=False, help="Initialize phase")
@click.option("--join-network", is_flag=True, default=False, help="Join phase")
@click.option("--connect-network", is_flag=True, default=False, help="Connect phase")
@click.option("--create-network", is_flag=True, default=False, help="Create phase")
@@ -6,7 +6,7 @@
 import secrets
 import socket
 import time
-from typing import Optional
+
 import requests
 from kubernetes import client

@@ -15,7 +15,8 @@ def get_server_egress_ip() -> str:
    """Get this server's public egress IP via ipify."""
    response = requests.get("https://api.ipify.org", timeout=10)
    response.raise_for_status()
-    return response.text.strip()
+    result: str = response.text.strip()
+    return result


 def resolve_hostname(hostname: str) -> list[str]:
@@ -27,7 +28,7 @@ def resolve_hostname(hostname: str) -> list[str]:
        return []


-def verify_dns_simple(hostname: str, expected_ip: Optional[str] = None) -> bool:
+def verify_dns_simple(hostname: str, expected_ip: str | None = None) -> bool:
    """Simple DNS verification - check hostname resolves to expected IP.

    If expected_ip not provided, uses server's egress IP.
@@ -98,9 +99,7 @@ def delete_probe_ingress(namespace: str = "default"):
    """Delete the temporary probe ingress."""
    networking_api = client.NetworkingV1Api()
    try:
-        networking_api.delete_namespaced_ingress(
-            name="laconic-dns-probe", namespace=namespace
-        )
+        networking_api.delete_namespaced_ingress(name="laconic-dns-probe", namespace=namespace)
    except client.exceptions.ApiException:
        pass  # Ignore if already deleted

@@ -13,15 +13,14 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-from typing import Set

 from python_on_whales import DockerClient

 from stack_orchestrator import constants
-from stack_orchestrator.opts import opts
-from stack_orchestrator.deploy.deployment_context import DeploymentContext
 from stack_orchestrator.deploy.deploy_types import DeployCommandContext
 from stack_orchestrator.deploy.deploy_util import images_for_deployment
+from stack_orchestrator.deploy.deployment_context import DeploymentContext
+from stack_orchestrator.opts import opts


 def _image_needs_pushed(image: str):
@@ -32,9 +31,7 @@ def _image_needs_pushed(image: str):
 def _remote_tag_for_image(image: str, remote_repo_url: str):
    # Turns image tags of the form: foo/bar:local into remote.repo/org/bar:deploy
    major_parts = image.split("/", 2)
-    image_name_with_version = (
-        major_parts[1] if 2 == len(major_parts) else major_parts[0]
-    )
+    image_name_with_version = major_parts[1] if 2 == len(major_parts) else major_parts[0]
    (image_name, image_version) = image_name_with_version.split(":")
    if image_version == "local":
        return f"{remote_repo_url}/{image_name}:deploy"
@@ -63,18 +60,14 @@ def add_tags_to_image(remote_repo_url: str, local_tag: str, *additional_tags):

    docker = DockerClient()
    remote_tag = _remote_tag_for_image(local_tag, remote_repo_url)
-    new_remote_tags = [
-        _remote_tag_for_image(tag, remote_repo_url) for tag in additional_tags
-    ]
+    new_remote_tags = [_remote_tag_for_image(tag, remote_repo_url) for tag in additional_tags]
    docker.buildx.imagetools.create(sources=[remote_tag], tags=new_remote_tags)


 def remote_tag_for_image_unique(image: str, remote_repo_url: str, deployment_id: str):
    # Turns image tags of the form: foo/bar:local into remote.repo/org/bar:deploy
    major_parts = image.split("/", 2)
-    image_name_with_version = (
-        major_parts[1] if 2 == len(major_parts) else major_parts[0]
-    )
+    image_name_with_version = major_parts[1] if 2 == len(major_parts) else major_parts[0]
    (image_name, image_version) = image_name_with_version.split(":")
    if image_version == "local":
        # Salt the tag with part of the deployment id to make it unique to this
@@ -91,24 +84,20 @@ def push_images_operation(
 ):
    # Get the list of images for the stack
    cluster_context = command_context.cluster_context
-    images: Set[str] = images_for_deployment(cluster_context.compose_files)
+    images: set[str] = images_for_deployment(cluster_context.compose_files)
    # Tag the images for the remote repo
    remote_repo_url = deployment_context.spec.obj[constants.image_registry_key]
    docker = DockerClient()
    for image in images:
        if _image_needs_pushed(image):
-            remote_tag = remote_tag_for_image_unique(
-                image, remote_repo_url, deployment_context.id
-            )
+            remote_tag = remote_tag_for_image_unique(image, remote_repo_url, deployment_context.id)
            if opts.o.verbose:
                print(f"Tagging {image} to {remote_tag}")
            docker.image.tag(image, remote_tag)
    # Run docker push commands to upload
    for image in images:
        if _image_needs_pushed(image):
-            remote_tag = remote_tag_for_image_unique(
-                image, remote_repo_url, deployment_context.id
-            )
+            remote_tag = remote_tag_for_image_unique(image, remote_repo_url, deployment_context.id)
            if opts.o.verbose:
                print(f"Pushing image {remote_tag}")
            docker.image.push(remote_tag)
@@ -16,21 +16,21 @@
 from pathlib import Path

 from stack_orchestrator import constants
-from stack_orchestrator.opts import opts
-from stack_orchestrator.util import (
-    get_parsed_stack_config,
-    get_pod_list,
-    get_pod_file_path,
-    get_job_list,
-    get_job_file_path,
-    error_exit,
-)
 from stack_orchestrator.deploy.k8s.helm.kompose_wrapper import (
    check_kompose_available,
-    get_kompose_version,
    convert_to_helm_chart,
+    get_kompose_version,
+)
+from stack_orchestrator.opts import opts
+from stack_orchestrator.util import (
+    error_exit,
+    get_job_file_path,
+    get_job_list,
+    get_parsed_stack_config,
+    get_pod_file_path,
+    get_pod_list,
+    get_yaml,
 )
-from stack_orchestrator.util import get_yaml


 def _wrap_job_templates_with_conditionals(chart_dir: Path, jobs: list) -> None:
@@ -88,7 +88,7 @@ def _post_process_chart(chart_dir: Path, chart_name: str, jobs: list) -> None:
    # Fix Chart.yaml
    chart_yaml_path = chart_dir / "Chart.yaml"
    if chart_yaml_path.exists():
-        chart_yaml = yaml.load(open(chart_yaml_path, "r"))
+        chart_yaml = yaml.load(open(chart_yaml_path))

        # Fix name
        chart_yaml["name"] = chart_name
@@ -108,9 +108,7 @@ def _post_process_chart(chart_dir: Path, chart_name: str, jobs: list) -> None:
        _wrap_job_templates_with_conditionals(chart_dir, jobs)


-def generate_helm_chart(
-    stack_path: str, spec_file: str, deployment_dir_path: Path
-) -> None:
+def generate_helm_chart(stack_path: str, spec_file: str, deployment_dir_path: Path) -> None:
    """
    Generate a self-sufficient Helm chart from stack compose files using Kompose.

@@ -152,7 +150,7 @@ def generate_helm_chart(
        error_exit(f"Deployment file not found: {deployment_file}")

    yaml = get_yaml()
-    deployment_config = yaml.load(open(deployment_file, "r"))
+    deployment_config = yaml.load(open(deployment_file))
    cluster_id = deployment_config.get(constants.cluster_id_key)
    if not cluster_id:
        error_exit(f"cluster-id not found in {deployment_file}")
@@ -219,10 +217,7 @@ def generate_helm_chart(
    # 5. Create chart directory and invoke Kompose
    chart_dir = deployment_dir_path / "chart"

-    print(
-        f"Converting {len(compose_files)} compose file(s) to Helm chart "
-        "using Kompose..."
-    )
+    print(f"Converting {len(compose_files)} compose file(s) to Helm chart " "using Kompose...")

    try:
        output = convert_to_helm_chart(
@@ -304,9 +299,7 @@ Edit the generated template files in `templates/` to customize:

    # Count generated files
    template_files = (
-        list((chart_dir / "templates").glob("*.yaml"))
-        if (chart_dir / "templates").exists()
-        else []
+        list((chart_dir / "templates").glob("*.yaml")) if (chart_dir / "templates").exists() else []
    )
    print(f"  Files:    {len(template_files)} template(s) generated")

@@ -13,12 +13,12 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

+import json
+import os
 import subprocess
 import tempfile
-import os
-import json
 from pathlib import Path
-from typing import Optional
+
 from stack_orchestrator.util import get_yaml


@@ -40,18 +40,19 @@ def get_release_name_from_chart(chart_dir: Path) -> str:
        raise Exception(f"Chart.yaml not found: {chart_yaml_path}")

    yaml = get_yaml()
-    chart_yaml = yaml.load(open(chart_yaml_path, "r"))
+    chart_yaml = yaml.load(open(chart_yaml_path))

    if "name" not in chart_yaml:
        raise Exception(f"Chart name not found in {chart_yaml_path}")

-    return chart_yaml["name"]
+    name: str = chart_yaml["name"]
+    return name


 def run_helm_job(
    chart_dir: Path,
    job_name: str,
-    release: Optional[str] = None,
+    release: str | None = None,
    namespace: str = "default",
    timeout: int = 600,
    verbose: bool = False,
@@ -94,9 +95,7 @@ def run_helm_job(
        print(f"Running job '{job_name}' from helm chart: {chart_dir}")

    # Use helm template to render the job manifest
-    with tempfile.NamedTemporaryFile(
-        mode="w", suffix=".yaml", delete=False
-    ) as tmp_file:
+    with tempfile.NamedTemporaryFile(mode="w", suffix=".yaml", delete=False) as tmp_file:
        try:
            # Render job template with job enabled
            # Use --set-json to properly handle job names with dashes
@@ -116,9 +115,7 @@ def run_helm_job(
            if verbose:
                print(f"Running: {' '.join(helm_cmd)}")

-            result = subprocess.run(
-                helm_cmd, check=True, capture_output=True, text=True
-            )
+            result = subprocess.run(helm_cmd, check=True, capture_output=True, text=True)
            tmp_file.write(result.stdout)
            tmp_file.flush()

@@ -139,9 +136,7 @@ def run_helm_job(
                "-n",
                namespace,
            ]
-            subprocess.run(
-                kubectl_apply_cmd, check=True, capture_output=True, text=True
-            )
+            subprocess.run(kubectl_apply_cmd, check=True, capture_output=True, text=True)

            if verbose:
                print(f"Job {actual_job_name} created, waiting for completion...")
@@ -164,7 +159,7 @@ def run_helm_job(

        except subprocess.CalledProcessError as e:
            error_msg = e.stderr if e.stderr else str(e)
-            raise Exception(f"Job failed: {error_msg}")
+            raise Exception(f"Job failed: {error_msg}") from e
        finally:
            # Clean up temp file
            if os.path.exists(tmp_file.name):
@@ -13,10 +13,9 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-import subprocess
 import shutil
+import subprocess
 from pathlib import Path
-from typing import List, Optional


 def check_kompose_available() -> bool:
@@ -37,9 +36,7 @@ def get_kompose_version() -> str:
    if not check_kompose_available():
        raise Exception("kompose not found in PATH")

-    result = subprocess.run(
-        ["kompose", "version"], capture_output=True, text=True, timeout=10
-    )
+    result = subprocess.run(["kompose", "version"], capture_output=True, text=True, timeout=10)

    if result.returncode != 0:
        raise Exception(f"Failed to get kompose version: {result.stderr}")
@@ -53,7 +50,7 @@ def get_kompose_version() -> str:


 def convert_to_helm_chart(
-    compose_files: List[Path], output_dir: Path, chart_name: Optional[str] = None
+    compose_files: list[Path], output_dir: Path, chart_name: str | None = None
 ) -> str:
    """
    Invoke kompose to convert Docker Compose files to a Helm chart.
@@ -71,8 +68,7 @@ def convert_to_helm_chart(
    """
    if not check_kompose_available():
        raise Exception(
-            "kompose not found in PATH. "
-            "Install from: https://kompose.io/installation/"
+            "kompose not found in PATH. " "Install from: https://kompose.io/installation/"
        )

    # Ensure output directory exists
@@ -95,9 +91,7 @@ def convert_to_helm_chart(

    if result.returncode != 0:
        raise Exception(
-            f"Kompose conversion failed:\n"
-            f"Command: {' '.join(cmd)}\n"
-            f"Error: {result.stderr}"
+            f"Kompose conversion failed:\n" f"Command: {' '.join(cmd)}\n" f"Error: {result.stderr}"
        )

    return result.stdout
@@ -13,20 +13,22 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

+import os
+import re
+import subprocess
+from collections.abc import Mapping
+from pathlib import Path
+from typing import cast
+
+import yaml
 from kubernetes import client, utils, watch
 from kubernetes.client.exceptions import ApiException
-import os
-from pathlib import Path
-import subprocess
-import re
-from typing import Set, Mapping, List, Optional, cast
-import yaml

-from stack_orchestrator.util import get_k8s_dir, error_exit
-from stack_orchestrator.opts import opts
+from stack_orchestrator import constants
 from stack_orchestrator.deploy.deploy_util import parsed_pod_files_map_from_file_names
 from stack_orchestrator.deploy.deployer import DeployerException
-from stack_orchestrator import constants
+from stack_orchestrator.opts import opts
+from stack_orchestrator.util import error_exit, get_k8s_dir


 def is_host_path_mount(volume_name: str) -> bool:
@@ -77,9 +79,7 @@ def get_kind_cluster():
    Uses `kind get clusters` to find existing clusters.
    Returns the cluster name or None if no cluster exists.
    """
-    result = subprocess.run(
-        "kind get clusters", shell=True, capture_output=True, text=True
-    )
+    result = subprocess.run("kind get clusters", shell=True, capture_output=True, text=True)
    if result.returncode != 0:
        return None

@@ -98,12 +98,12 @@ def _run_command(command: str):
    return result


-def _get_etcd_host_path_from_kind_config(config_file: str) -> Optional[str]:
+def _get_etcd_host_path_from_kind_config(config_file: str) -> str | None:
    """Extract etcd host path from kind config extraMounts."""
    import yaml

    try:
-        with open(config_file, "r") as f:
+        with open(config_file) as f:
            config = yaml.safe_load(f)
    except Exception:
        return None
@@ -113,7 +113,8 @@ def _get_etcd_host_path_from_kind_config(config_file: str) -> Optional[str]:
        extra_mounts = node.get("extraMounts", [])
        for mount in extra_mounts:
            if mount.get("containerPath") == "/var/lib/etcd":
-                return mount.get("hostPath")
+                host_path: str | None = mount.get("hostPath")
+                return host_path
    return None


@@ -133,8 +134,7 @@ def _clean_etcd_keeping_certs(etcd_path: str) -> bool:
    db_path = Path(etcd_path) / "member" / "snap" / "db"
    # Check existence using docker since etcd dir is root-owned
    check_cmd = (
-        f"docker run --rm -v {etcd_path}:/etcd:ro alpine:3.19 "
-        "test -f /etcd/member/snap/db"
+        f"docker run --rm -v {etcd_path}:/etcd:ro alpine:3.19 " "test -f /etcd/member/snap/db"
    )
    check_result = subprocess.run(check_cmd, shell=True, capture_output=True)
    if check_result.returncode != 0:
@@ -148,8 +148,16 @@ def _clean_etcd_keeping_certs(etcd_path: str) -> bool:
    etcd_image = "gcr.io/etcd-development/etcd:v3.5.9"
    temp_dir = "/tmp/laconic-etcd-cleanup"

-    # Whitelist: prefixes to KEEP - everything else gets deleted
-    keep_prefixes = "/registry/secrets/caddy-system"
+    # Whitelist: prefixes to KEEP - everything else gets deleted.
+    # Must include core cluster resources (kubernetes service, kube-system
+    # secrets) or kindnet panics on restart — KUBERNETES_SERVICE_HOST is
+    # injected from the kubernetes ClusterIP service in default namespace.
+    keep_prefixes = [
+        "/registry/secrets/caddy-system",
+        "/registry/services/specs/default/kubernetes",
+        "/registry/services/endpoints/default/kubernetes",
+    ]
+    keep_prefixes_str = " ".join(keep_prefixes)

    # The etcd image is distroless (no shell). We extract the statically-linked
    # etcdctl binary and run it from alpine which has shell + jq support.
@@ -195,13 +203,21 @@ def _clean_etcd_keeping_certs(etcd_path: str) -> bool:
        sleep 3

        # Use alpine with extracted etcdctl to run commands (alpine has shell + jq)
-        # Export caddy secrets
+        # Export whitelisted keys (caddy TLS certs + core cluster services)
        docker run --rm \
            -v {temp_dir}:/backup \
            --network container:laconic-etcd-cleanup \
-            $ALPINE_IMAGE sh -c \
-            '/backup/etcdctl get --prefix "{keep_prefixes}" -w json \
-                > /backup/kept.json 2>/dev/null || echo "{{}}" > /backup/kept.json'
+            $ALPINE_IMAGE sh -c '
+                apk add --no-cache jq >/dev/null 2>&1
+                echo "[]" > /backup/all-kvs.json
+                for prefix in {keep_prefixes_str}; do
+                    /backup/etcdctl get --prefix "$prefix" -w json 2>/dev/null \
+                        | jq ".kvs // []" >> /backup/all-kvs.json || true
+                done
+                jq -s "add" /backup/all-kvs.json \
+                    | jq "{{kvs: .}}" > /backup/kept.json 2>/dev/null \
+                    || echo "{{}}" > /backup/kept.json
+            '

        # Delete ALL registry keys
        docker run --rm \
@@ -321,7 +337,7 @@ def is_ingress_running() -> bool:

 def wait_for_ingress_in_kind():
    core_v1 = client.CoreV1Api()
-    for i in range(20):
+    for _i in range(20):
        warned_waiting = False
        w = watch.Watch()
        for event in w.stream(
@@ -348,9 +364,7 @@ def wait_for_ingress_in_kind():
 def install_ingress_for_kind(acme_email: str = ""):
    api_client = client.ApiClient()
    ingress_install = os.path.abspath(
-        get_k8s_dir().joinpath(
-            "components", "ingress", "ingress-caddy-kind-deploy.yaml"
-        )
+        get_k8s_dir().joinpath("components", "ingress", "ingress-caddy-kind-deploy.yaml")
    )
    if opts.o.debug:
        print("Installing Caddy ingress controller in kind cluster")
@@ -384,21 +398,88 @@ def install_ingress_for_kind(acme_email: str = ""):
        )


-def load_images_into_kind(kind_cluster_name: str, image_set: Set[str]):
-    for image in image_set:
+LOCAL_REGISTRY_NAME = "kind-registry"
+LOCAL_REGISTRY_HOST_PORT = 5001
+LOCAL_REGISTRY_CONTAINER_PORT = 5000
+
+
+def ensure_local_registry():
+    """Ensure a persistent local registry container is running.
+
+    The registry survives kind cluster recreates — images pushed to it
+    remain available without re-pushing. After ensuring the registry is
+    running, connects it to the kind Docker network so kind nodes can
+    pull from it.
+    """
+    # Check if registry container exists (running or stopped)
+    check = subprocess.run(
+        f"docker inspect {LOCAL_REGISTRY_NAME}",
+        shell=True,
+        capture_output=True,
+    )
+    if check.returncode != 0:
+        # Create the registry container
        result = _run_command(
-            f"kind load docker-image {image} --name {kind_cluster_name}"
+            f"docker run -d --restart=always"
+            f" -p {LOCAL_REGISTRY_HOST_PORT}:{LOCAL_REGISTRY_CONTAINER_PORT}"
+            f" --name {LOCAL_REGISTRY_NAME} registry:2"
        )
        if result.returncode != 0:
-            raise DeployerException(f"kind load docker-image failed: {result}")
+            raise DeployerException(f"Failed to start local registry: {result}")
+        print(f"Started local registry on port {LOCAL_REGISTRY_HOST_PORT}")
+    else:
+        # Ensure it's running (may have been stopped)
+        _run_command(f"docker start {LOCAL_REGISTRY_NAME}")
+        if opts.o.debug:
+            print("Local registry already exists, ensured running")


-def pods_in_deployment(
-    core_api: client.CoreV1Api, deployment_name: str, namespace: str = "default"
-):
+def connect_registry_to_kind_network(kind_cluster_name: str):
+    """Connect the local registry to the kind Docker network.
+
+    Idempotent — silently succeeds if already connected.
+    """
+    network = "kind"
+    result = subprocess.run(
+        f"docker network connect {network} {LOCAL_REGISTRY_NAME}",
+        shell=True,
+        capture_output=True,
+    )
+    if result.returncode != 0 and b"already exists" not in result.stderr:
+        raise DeployerException(
+            f"Failed to connect registry to kind network: " f"{result.stderr.decode()}"
+        )
+
+
+def push_images_to_local_registry(image_set: set[str]):
+    """Tag and push images to the local registry.
+
+    Near-instant compared to kind load (shared filesystem, layer dedup).
+    """
+    for image in image_set:
+        registry_image = local_registry_image(image)
+        tag_result = _run_command(f"docker tag {image} {registry_image}")
+        if tag_result.returncode != 0:
+            raise DeployerException(f"docker tag failed for {image}: {tag_result}")
+        push_result = _run_command(f"docker push {registry_image}")
+        if push_result.returncode != 0:
+            raise DeployerException(f"docker push failed for {registry_image}: {push_result}")
+        if opts.o.debug:
+            print(f"Pushed {registry_image} to local registry")
+
+
+def local_registry_image(image: str) -> str:
+    """Rewrite an image reference to use the local registry.
+
+    e.g. laconicnetwork/agave:local -> localhost:5001/laconicnetwork/agave:local
+    """
+    return f"localhost:{LOCAL_REGISTRY_HOST_PORT}/{image}"
+
+
+def pods_in_deployment(core_api: client.CoreV1Api, deployment_name: str):
    pods = []
    pod_response = core_api.list_namespaced_pod(
-        namespace=namespace, label_selector=f"app={deployment_name}"
+        namespace="default", label_selector=f"app={deployment_name}"
    )
    if opts.o.debug:
        print(f"pod_response: {pod_response}")
@@ -408,13 +489,9 @@ def pods_in_deployment(
    return pods


-def containers_in_pod(
-    core_api: client.CoreV1Api, pod_name: str, namespace: str = "default"
-) -> List[str]:
-    containers: List[str] = []
-    pod_response = cast(
-        client.V1Pod, core_api.read_namespaced_pod(pod_name, namespace=namespace)
-    )
+def containers_in_pod(core_api: client.CoreV1Api, pod_name: str) -> list[str]:
+    containers: list[str] = []
+    pod_response = cast(client.V1Pod, core_api.read_namespaced_pod(pod_name, namespace="default"))
    if opts.o.debug:
        print(f"pod_response: {pod_response}")
    if not pod_response.spec or not pod_response.spec.containers:
@@ -437,27 +514,14 @@ def named_volumes_from_pod_files(parsed_pod_files):
        parsed_pod_file = parsed_pod_files[pod]
        if "volumes" in parsed_pod_file:
            volumes = parsed_pod_file["volumes"]
-            for volume, value in volumes.items():
+            for volume, _value in volumes.items():
                # Volume definition looks like:
                # 'laconicd-data': None
                named_volumes.append(volume)
    return named_volumes


-def get_kind_pv_bind_mount_path(
-    volume_name: str,
-    kind_mount_root: Optional[str] = None,
-    host_path: Optional[str] = None,
-):
-    """Get the path inside the Kind node for a PV.
-
-    When kind-mount-root is set and the volume's host path is under
-    that root, return /mnt/{relative_path} so it resolves through the
-    single root extraMount. Otherwise fall back to /mnt/{volume_name}.
-    """
-    if kind_mount_root and host_path and host_path.startswith(kind_mount_root):
-        rel = os.path.relpath(host_path, kind_mount_root)
-        return f"/mnt/{rel}"
+def get_kind_pv_bind_mount_path(volume_name: str):
    return f"/mnt/{volume_name}"


@@ -482,14 +546,10 @@ def volume_mounts_for_service(parsed_pod_files, service):
                            mount_split = mount_string.split(":")
                            volume_name = mount_split[0]
                            mount_path = mount_split[1]
-                            mount_options = (
-                                mount_split[2] if len(mount_split) == 3 else None
-                            )
+                            mount_options = mount_split[2] if len(mount_split) == 3 else None
                            # For host path mounts, use sanitized name
                            if is_host_path_mount(volume_name):
-                                k8s_volume_name = sanitize_host_path_to_volume_name(
-                                    volume_name
-                                )
+                                k8s_volume_name = sanitize_host_path_to_volume_name(volume_name)
                            else:
                                k8s_volume_name = volume_name
                            if opts.o.debug:
@@ -528,9 +588,7 @@ def volumes_for_pod_files(parsed_pod_files, spec, app_name):
                    claim = client.V1PersistentVolumeClaimVolumeSource(
                        claim_name=f"{app_name}-{volume_name}"
                    )
-                    volume = client.V1Volume(
-                        name=volume_name, persistent_volume_claim=claim
-                    )
+                    volume = client.V1Volume(name=volume_name, persistent_volume_claim=claim)
                    result.append(volume)

        # Handle host path mounts from service volumes
@@ -543,15 +601,11 @@ def volumes_for_pod_files(parsed_pod_files, spec, app_name):
                        mount_split = mount_string.split(":")
                        volume_source = mount_split[0]
                        if is_host_path_mount(volume_source):
-                            sanitized_name = sanitize_host_path_to_volume_name(
-                                volume_source
-                            )
+                            sanitized_name = sanitize_host_path_to_volume_name(volume_source)
                            if sanitized_name not in seen_host_path_volumes:
                                seen_host_path_volumes.add(sanitized_name)
                                # Create hostPath volume for mount inside kind node
-                                kind_mount_path = get_kind_host_path_mount_path(
-                                    sanitized_name
-                                )
+                                kind_mount_path = get_kind_host_path_mount_path(sanitized_name)
                                host_path_source = client.V1HostPathVolumeSource(
                                    path=kind_mount_path, type="FileOrCreate"
                                )
@@ -580,37 +634,26 @@ def _generate_kind_mounts(parsed_pod_files, deployment_dir, deployment_context):
    volume_definitions = []
    volume_host_path_map = _get_host_paths_for_volumes(deployment_context)
    seen_host_path_mounts = set()  # Track to avoid duplicate mounts
-    kind_mount_root = deployment_context.spec.get_kind_mount_root()

    # Cluster state backup for offline data recovery (unique per deployment)
    # etcd contains all k8s state; PKI certs needed to decrypt etcd offline
    deployment_id = deployment_context.id
    backup_subdir = f"cluster-backups/{deployment_id}"

-    etcd_host_path = _make_absolute_host_path(
-        Path(f"./data/{backup_subdir}/etcd"), deployment_dir
-    )
+    etcd_host_path = _make_absolute_host_path(Path(f"./data/{backup_subdir}/etcd"), deployment_dir)
    volume_definitions.append(
-        f"  - hostPath: {etcd_host_path}\n" f"    containerPath: /var/lib/etcd\n"
+        f"  - hostPath: {etcd_host_path}\n"
+        f"    containerPath: /var/lib/etcd\n"
+        f"    propagation: HostToContainer\n"
    )

-    pki_host_path = _make_absolute_host_path(
-        Path(f"./data/{backup_subdir}/pki"), deployment_dir
-    )
+    pki_host_path = _make_absolute_host_path(Path(f"./data/{backup_subdir}/pki"), deployment_dir)
    volume_definitions.append(
-        f"  - hostPath: {pki_host_path}\n" f"    containerPath: /etc/kubernetes/pki\n"
+        f"  - hostPath: {pki_host_path}\n"
+        f"    containerPath: /etc/kubernetes/pki\n"
+        f"    propagation: HostToContainer\n"
    )

-    # When kind-mount-root is set, emit a single extraMount for the root.
-    # Individual volumes whose host path starts with the root are covered
-    # by this single mount and don't need their own extraMount entries.
-    mount_root_emitted = False
-    if kind_mount_root:
-        volume_definitions.append(
-            f"  - hostPath: {kind_mount_root}\n" f"    containerPath: /mnt\n"
-        )
-        mount_root_emitted = True
-
    # Note these paths are relative to the location of the pod files (at present)
    # So we need to fix up to make them correct and absolute because kind assumes
    # relative to the cwd.
@@ -634,21 +677,16 @@ def _generate_kind_mounts(parsed_pod_files, deployment_dir, deployment_context):

                        if is_host_path_mount(volume_name):
                            # Host path mount - add extraMount for kind
-                            sanitized_name = sanitize_host_path_to_volume_name(
-                                volume_name
-                            )
+                            sanitized_name = sanitize_host_path_to_volume_name(volume_name)
                            if sanitized_name not in seen_host_path_mounts:
                                seen_host_path_mounts.add(sanitized_name)
                                # Resolve path relative to compose directory
-                                host_path = resolve_host_path_for_kind(
-                                    volume_name, deployment_dir
-                                )
-                                container_path = get_kind_host_path_mount_path(
-                                    sanitized_name
-                                )
+                                host_path = resolve_host_path_for_kind(volume_name, deployment_dir)
+                                container_path = get_kind_host_path_mount_path(sanitized_name)
                                volume_definitions.append(
                                    f"  - hostPath: {host_path}\n"
                                    f"    containerPath: {container_path}\n"
+                                    f"    propagation: HostToContainer\n"
                                )
                                if opts.o.debug:
                                    print(f"Added host path mount: {host_path}")
@@ -658,10 +696,7 @@ def _generate_kind_mounts(parsed_pod_files, deployment_dir, deployment_context):
                                print(f"volume_name: {volume_name}")
                                print(f"map: {volume_host_path_map}")
                                print(f"mount path: {mount_path}")
-                            if (
-                                volume_name
-                                not in deployment_context.spec.get_configmaps()
-                            ):
+                            if volume_name not in deployment_context.spec.get_configmaps():
                                if (
                                    volume_name in volume_host_path_map
                                    and volume_host_path_map[volume_name]
@@ -670,18 +705,11 @@ def _generate_kind_mounts(parsed_pod_files, deployment_dir, deployment_context):
                                        volume_host_path_map[volume_name],
                                        deployment_dir,
                                    )
-                                    # Skip individual extraMount if covered
-                                    # by the kind-mount-root single mount
-                                    if mount_root_emitted and str(host_path).startswith(
-                                        kind_mount_root
-                                    ):
-                                        continue
-                                    container_path = get_kind_pv_bind_mount_path(
-                                        volume_name
-                                    )
+                                    container_path = get_kind_pv_bind_mount_path(volume_name)
                                    volume_definitions.append(
                                        f"  - hostPath: {host_path}\n"
                                        f"    containerPath: {container_path}\n"
+                                        f"    propagation: HostToContainer\n"
                                    )
    return (
        ""
@@ -705,8 +733,7 @@ def _generate_kind_port_mappings_from_services(parsed_pod_files):
                        # TODO handle the complex cases
                        # Looks like: 80 or something more complicated
                        port_definitions.append(
-                            f"  - containerPort: {port_string}\n"
-                            f"    hostPort: {port_string}\n"
+                            f"  - containerPort: {port_string}\n" f"    hostPort: {port_string}\n"
                        )
    return (
        ""
@@ -719,9 +746,7 @@ def _generate_kind_port_mappings(parsed_pod_files):
    port_definitions = []
    # Map port 80 and 443 for the Caddy ingress controller (HTTPS support)
    for port_string in ["80", "443"]:
-        port_definitions.append(
-            f"  - containerPort: {port_string}\n    hostPort: {port_string}\n"
-        )
+        port_definitions.append(f"  - containerPort: {port_string}\n    hostPort: {port_string}\n")
    return (
        ""
        if len(port_definitions) == 0
@@ -737,7 +762,11 @@ def _generate_high_memlock_spec_mount(deployment_dir: Path):
    references an absolute path.
    """
    spec_path = deployment_dir.joinpath(constants.high_memlock_spec_filename).resolve()
-    return f"  - hostPath: {spec_path}\n" f"    containerPath: {spec_path}\n"
+    return (
+        f"  - hostPath: {spec_path}\n"
+        f"    containerPath: {spec_path}\n"
+        f"    propagation: HostToContainer\n"
+    )


 def generate_high_memlock_spec_json():
@@ -911,27 +940,37 @@ def generate_cri_base_json():
    return generate_high_memlock_spec_json()


-def _generate_containerd_config_patches(
-    deployment_dir: Path, has_high_memlock: bool
-) -> str:
-    """Generate containerdConfigPatches YAML for custom runtime handlers.
+def _generate_containerd_config_patches(deployment_dir: Path, has_high_memlock: bool) -> str:
+    """Generate containerdConfigPatches YAML for containerd configuration.

-    This configures containerd to have a runtime handler named 'high-memlock'
-    that uses a custom OCI base spec with unlimited RLIMIT_MEMLOCK.
+    Includes:
+    - Local registry mirror (localhost:5001 -> http://kind-registry:5000)
+    - Custom runtime handler for high-memlock (if enabled)
    """
-    if not has_high_memlock:
+    patches = []
+
+    # Always configure the local registry mirror so kind nodes pull from it
+    registry_plugin = f'plugins."io.containerd.grpc.v1.cri".registry.mirrors."localhost:{LOCAL_REGISTRY_HOST_PORT}"'
+    endpoint = f"http://{LOCAL_REGISTRY_NAME}:{LOCAL_REGISTRY_CONTAINER_PORT}"
+    patches.append(f"    [{registry_plugin}]\n" f'      endpoint = ["{endpoint}"]')
+
+    if has_high_memlock:
+        spec_path = deployment_dir.joinpath(constants.high_memlock_spec_filename).resolve()
+        runtime_name = constants.high_memlock_runtime
+        plugin_path = 'plugins."io.containerd.grpc.v1.cri".containerd.runtimes'
+        patches.append(
+            f"    [{plugin_path}.{runtime_name}]\n"
+            '      runtime_type = "io.containerd.runc.v2"\n'
+            f'      base_runtime_spec = "{spec_path}"'
+        )
+
+    if not patches:
        return ""

-    spec_path = deployment_dir.joinpath(constants.high_memlock_spec_filename).resolve()
-    runtime_name = constants.high_memlock_runtime
-    plugin_path = 'plugins."io.containerd.grpc.v1.cri".containerd.runtimes'
-    return (
-        "containerdConfigPatches:\n"
-        "  - |-\n"
-        f"    [{plugin_path}.{runtime_name}]\n"
-        '      runtime_type = "io.containerd.runc.v2"\n'
-        f'      base_runtime_spec = "{spec_path}"\n'
-    )
+    result = "containerdConfigPatches:\n"
+    for patch in patches:
+        result += "  - |-\n" + patch + "\n"
+    return result


 # Note: this makes any duplicate definition in b overwrite a
@@ -940,9 +979,7 @@ def merge_envs(a: Mapping[str, str], b: Mapping[str, str]) -> Mapping[str, str]:
    return result


-def _expand_shell_vars(
-    raw_val: str, env_map: Optional[Mapping[str, str]] = None
-) -> str:
+def _expand_shell_vars(raw_val: str, env_map: Mapping[str, str] | None = None) -> str:
    # Expand docker-compose style variable substitution:
    # ${VAR} - use VAR value or empty string
    # ${VAR:-default} - use VAR value or default if unset/empty
@@ -967,7 +1004,7 @@ def _expand_shell_vars(


 def envs_from_compose_file(
-    compose_file_envs: Mapping[str, str], env_map: Optional[Mapping[str, str]] = None
+    compose_file_envs: Mapping[str, str], env_map: Mapping[str, str] | None = None
 ) -> Mapping[str, str]:
    result = {}
    for env_var, env_val in compose_file_envs.items():
@@ -977,7 +1014,7 @@ def envs_from_compose_file(


 def translate_sidecar_service_names(
-    envs: Mapping[str, str], sibling_service_names: List[str]
+    envs: Mapping[str, str], sibling_service_names: list[str]
 ) -> Mapping[str, str]:
    """Translate docker-compose service names to localhost for sidecar containers.

@@ -1004,7 +1041,12 @@ def translate_sidecar_service_names(
            # Handle URLs like: postgres://user:pass@db:5432/dbname
            # and simple refs like: db:5432 or just db
            pattern = rf"\b{re.escape(service_name)}(:\d+)?\b"
-            new_val = re.sub(pattern, lambda m: f'localhost{m.group(1) or ""}', new_val)
+
+            def _replace_with_localhost(m: re.Match[str]) -> str:
+                port: str = m.group(1) or ""
+                return "localhost" + port
+
+            new_val = re.sub(pattern, _replace_with_localhost, new_val)

        result[env_var] = new_val

@@ -1013,7 +1055,7 @@ def translate_sidecar_service_names(

 def envs_from_environment_variables_map(
    map: Mapping[str, str],
-) -> List[client.V1EnvVar]:
+) -> list[client.V1EnvVar]:
    result = []
    for env_var, env_val in map.items():
        result.append(client.V1EnvVar(env_var, env_val))
@@ -1044,17 +1086,13 @@ def generate_kind_config(deployment_dir: Path, deployment_context):
    pod_files = [p for p in compose_file_dir.iterdir() if p.is_file()]
    parsed_pod_files_map = parsed_pod_files_map_from_file_names(pod_files)
    port_mappings_yml = _generate_kind_port_mappings(parsed_pod_files_map)
-    mounts_yml = _generate_kind_mounts(
-        parsed_pod_files_map, deployment_dir, deployment_context
-    )
+    mounts_yml = _generate_kind_mounts(parsed_pod_files_map, deployment_dir, deployment_context)

    # Check if unlimited_memlock is enabled
    unlimited_memlock = deployment_context.spec.get_unlimited_memlock()

    # Generate containerdConfigPatches for RuntimeClass support
-    containerd_patches_yml = _generate_containerd_config_patches(
-        deployment_dir, unlimited_memlock
-    )
+    containerd_patches_yml = _generate_containerd_config_patches(deployment_dir, unlimited_memlock)

    # Add high-memlock spec file mount if needed
    if unlimited_memlock:
@@ -14,19 +14,18 @@
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

 import typing
-from typing import Optional
-import humanfriendly
-
 from pathlib import Path

-from stack_orchestrator.util import get_yaml
+import humanfriendly
+
 from stack_orchestrator import constants
+from stack_orchestrator.util import get_yaml


 class ResourceLimits:
-    cpus: Optional[float] = None
-    memory: Optional[int] = None
-    storage: Optional[int] = None
+    cpus: float | None = None
+    memory: int | None = None
+    storage: int | None = None

    def __init__(self, obj=None):
        if obj is None:
@@ -50,8 +49,8 @@ class ResourceLimits:


 class Resources:
-    limits: Optional[ResourceLimits] = None
-    reservations: Optional[ResourceLimits] = None
+    limits: ResourceLimits | None = None
+    reservations: ResourceLimits | None = None

    def __init__(self, obj=None):
        if obj is None:
@@ -74,9 +73,9 @@ class Resources:

 class Spec:
    obj: typing.Any
-    file_path: Optional[Path]
+    file_path: Path | None

-    def __init__(self, file_path: Optional[Path] = None, obj=None) -> None:
+    def __init__(self, file_path: Path | None = None, obj=None) -> None:
        if obj is None:
            obj = {}
        self.file_path = file_path
@@ -92,23 +91,23 @@ class Spec:
        return self.obj.get(item, default)

    def init_from_file(self, file_path: Path):
-        self.obj = get_yaml().load(open(file_path, "r"))
+        self.obj = get_yaml().load(open(file_path))
        self.file_path = file_path

    def get_image_registry(self):
        return self.obj.get(constants.image_registry_key)

-    def get_credentials_files(self) -> typing.List[str]:
-        """Returns list of credential file paths to append to config.env."""
-        return self.obj.get("credentials-files", [])
-
-    def get_image_registry_config(self) -> typing.Optional[typing.Dict]:
+    def get_image_registry_config(self) -> dict | None:
        """Returns registry auth config: {server, username, token-env}.

        Used for private container registries like GHCR. The token-env field
        specifies an environment variable containing the API token/PAT.
+
+        Note: Uses 'registry-credentials' key to avoid collision with
+        'image-registry' key which is for pushing images.
        """
-        return self.obj.get("image-pull-secret")
+        result: dict[str, str] | None = self.obj.get("registry-credentials")
+        return result

    def get_volumes(self):
        return self.obj.get(constants.volumes_key, {})
@@ -116,13 +115,23 @@ class Spec:
    def get_configmaps(self):
        return self.obj.get(constants.configmaps_key, {})

-    def get_secrets(self):
-        return self.obj.get(constants.secrets_key, {})
-
    def get_container_resources(self):
-        return Resources(
-            self.obj.get(constants.resources_key, {}).get("containers", {})
-        )
+        return Resources(self.obj.get(constants.resources_key, {}).get("containers", {}))
+
+    def get_container_resources_for(self, container_name: str) -> Resources | None:
+        """Look up per-container resource overrides from spec.yml.
+
+        Checks resources.containers.<container_name> in the spec. Returns None
+        if no per-container override exists (caller falls back to other sources).
+        """
+        containers_block = self.obj.get(constants.resources_key, {}).get("containers", {})
+        if container_name in containers_block:
+            entry = containers_block[container_name]
+            # Only treat it as a per-container override if it's a dict with
+            # reservations/limits nested inside (not a top-level global key)
+            if isinstance(entry, dict) and ("reservations" in entry or "limits" in entry):
+                return Resources(entry)
+        return None

    def get_container_resources_for(
        self, container_name: str
@@ -146,50 +155,11 @@ class Spec:
        return None

    def get_volume_resources(self):
-        return Resources(
-            self.obj.get(constants.resources_key, {}).get(constants.volumes_key, {})
-        )
-
-    def get_volume_resources_for(self, volume_name: str) -> typing.Optional[Resources]:
-        """Look up per-volume resource overrides from spec.yml.
-
-        Supports two formats under resources.volumes:
-
-        Global (original):
-            resources:
-              volumes:
-                reservations:
-                  storage: 5Gi
-
-        Per-volume (new):
-            resources:
-              volumes:
-                my-volume:
-                  reservations:
-                    storage: 10Gi
-
-        Returns the per-volume Resources if found, otherwise None.
-        The caller should fall back to get_volume_resources() then the default.
-        """
-        vol_section = self.obj.get(constants.resources_key, {}).get(
-            constants.volumes_key, {}
-        )
-        if volume_name not in vol_section:
-            return None
-        entry = vol_section[volume_name]
-        if isinstance(entry, dict) and ("reservations" in entry or "limits" in entry):
-            return Resources(entry)
-        return None
+        return Resources(self.obj.get(constants.resources_key, {}).get(constants.volumes_key, {}))

    def get_http_proxy(self):
        return self.obj.get(constants.network_key, {}).get(constants.http_proxy_key, [])

-    def get_namespace(self):
-        return self.obj.get("namespace")
-
-    def get_kind_cluster_name(self):
-        return self.obj.get("kind-cluster-name")
-
    def get_annotations(self):
        return self.obj.get(constants.annotations_key, {})

@@ -208,9 +178,7 @@ class Spec:
    def get_privileged(self):
        return (
            "true"
-            == str(
-                self.obj.get(constants.security_key, {}).get("privileged", "false")
-            ).lower()
+            == str(self.obj.get(constants.security_key, {}).get("privileged", "false")).lower()
        )

    def get_capabilities(self):
@@ -237,9 +205,7 @@ class Spec:
            Runtime class name string, or None to use default runtime.
        """
        # Explicit runtime class takes precedence
-        explicit = self.obj.get(constants.security_key, {}).get(
-            constants.runtime_class_key, None
-        )
+        explicit = self.obj.get(constants.security_key, {}).get(constants.runtime_class_key, None)
        if explicit:
            return explicit

@@ -264,46 +230,5 @@ class Spec:
    def is_kind_deployment(self):
        return self.get_deployment_type() in [constants.k8s_kind_deploy_type]

-    def get_kind_mount_root(self) -> typing.Optional[str]:
-        """Return kind-mount-root path or None.
-
-        When set, laconic-so emits a single Kind extraMount mapping this
-        host path to /mnt inside the Kind node. Volumes with host paths
-        under this root resolve to /mnt/{relative_path} and don't need
-        individual extraMounts. This allows adding new volumes without
-        recreating the Kind cluster.
-        """
-        return self.obj.get(constants.kind_mount_root_key)
-
-    def get_maintenance_service(self) -> typing.Optional[str]:
-        """Return maintenance-service value (e.g. 'dumpster-maintenance:8000') or None.
-
-        When set, the restart command swaps Ingress backends to this service
-        during the main pod Recreate, so users see a branded maintenance page
-        instead of a bare 502.
-        """
-        return self.obj.get("maintenance-service")
-
-    def get_external_services(self) -> typing.Dict[str, typing.Dict]:
-        """Return external-services config from spec.
-
-        Each entry maps a service name to its routing config:
-        - host mode: {host: "example.com", port: 443}
-          → ExternalName k8s Service (DNS CNAME)
-        - selector mode: {selector: {app: "foo"}, namespace: "ns", port: 443}
-          → Headless Service + Endpoints (cross-namespace routing to mock pod)
-        """
-        return self.obj.get(constants.external_services_key, {})
-
-    def get_ca_certificates(self) -> typing.List[str]:
-        """Return list of CA certificate file paths to trust.
-
-        Used in testing specs to inject mkcert root CAs so containers
-        trust TLS certs on mock services. Files are mounted into all
-        containers at /etc/ssl/certs/ and NODE_EXTRA_CA_CERTS is set.
-        Production specs omit this key entirely.
-        """
-        return self.obj.get(constants.ca_certificates_key, [])
-
    def is_docker_deployment(self):
        return self.get_deployment_type() in [constants.compose_deploy_type]
@@ -13,8 +13,9 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-from pathlib import Path
 import typing
+from pathlib import Path
+
 from stack_orchestrator.util import get_yaml


@@ -26,4 +27,4 @@ class Stack:
        self.name = name

    def init_from_file(self, file_path: Path):
-        self.obj = get_yaml().load(open(file_path, "r"))
+        self.obj = get_yaml().load(open(file_path))
@@ -13,23 +13,22 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-import click
 import os
 from pathlib import Path
-from urllib.parse import urlparse
 from tempfile import NamedTemporaryFile
+from urllib.parse import urlparse
+
+import click

-from stack_orchestrator.util import error_exit, global_options2, get_yaml
-from stack_orchestrator.deploy.deployment_create import init_operation, create_operation
 from stack_orchestrator.deploy.deploy import create_deploy_context
 from stack_orchestrator.deploy.deploy_types import DeployCommandContext
+from stack_orchestrator.deploy.deployment_create import create_operation, init_operation
+from stack_orchestrator.util import error_exit, global_options2


 def _fixup_container_tag(deployment_dir: str, image: str):
    deployment_dir_path = Path(deployment_dir)
-    compose_file = deployment_dir_path.joinpath(
-        "compose", "docker-compose-webapp-template.yml"
-    )
+    compose_file = deployment_dir_path.joinpath("compose", "docker-compose-webapp-template.yml")
    # replace "cerc/webapp-container:local" in the file with our image tag
    with open(compose_file) as rfile:
        contents = rfile.read()
@@ -41,28 +40,22 @@ def _fixup_container_tag(deployment_dir: str, image: str):
 def _fixup_url_spec(spec_file_name: str, url: str):
    # url is like: https://example.com/path
    parsed_url = urlparse(url)
+    http_proxy_spec = f"""
+  http-proxy:
+    - host-name: {parsed_url.hostname}
+      routes:
+        - path: '{parsed_url.path if parsed_url.path else "/"}'
+          proxy-to: webapp:80
+    """
    spec_file_path = Path(spec_file_name)
-    yaml = get_yaml()
    with open(spec_file_path) as rfile:
-        contents = yaml.load(rfile)
-    contents.setdefault("network", {})["http-proxy"] = [
-        {
-            "host-name": parsed_url.hostname,
-            "routes": [
-                {
-                    "path": parsed_url.path if parsed_url.path else "/",
-                    "proxy-to": "webapp:80",
-                }
-            ],
-        }
-    ]
+        contents = rfile.read()
+        contents = contents + http_proxy_spec
    with open(spec_file_path, "w") as wfile:
-        yaml.dump(contents, wfile)
+        wfile.write(contents)


-def create_deployment(
-    ctx, deployment_dir, image, url, kube_config, image_registry, env_file
-):
+def create_deployment(ctx, deployment_dir, image, url, kube_config, image_registry, env_file):
    # Do the equivalent of:
    # 1. laconic-so --stack webapp-template deploy --deploy-to k8s init \
    #    --output webapp-spec.yml
@@ -121,9 +114,7 @@ def command(ctx):
    "--image-registry",
    help="Provide a container image registry url for this k8s cluster",
 )
-@click.option(
-    "--deployment-dir", help="Create deployment files in this directory", required=True
-)
+@click.option("--deployment-dir", help="Create deployment files in this directory", required=True)
@click.option("--image", help="image to deploy", required=True)
@click.option("--url", help="url to serve", required=True)
@click.option("--env-file", help="environment file for webapp")
@@ -131,6 +122,4 @@ def command(ctx):
 def create(ctx, deployment_dir, image, url, kube_config, image_registry, env_file):
    """create a deployment for the specified webapp container"""

-    return create_deployment(
-        ctx, deployment_dir, image, url, kube_config, image_registry, env_file
-    )
+    return create_deployment(ctx, deployment_dir, image, url, kube_config, image_registry, env_file)
@@ -21,10 +21,10 @@ import sys
 import tempfile
 import time
 import uuid
-import yaml

 import click
 import gnupg
+import yaml

 from stack_orchestrator.deploy.images import remote_image_exists
 from stack_orchestrator.deploy.webapp import deploy_webapp
@@ -34,16 +34,16 @@ from stack_orchestrator.deploy.webapp.util import (
    TimedLogger,
    build_container_image,
    confirm_auction,
-    push_container_image,
-    file_hash,
-    deploy_to_k8s,
-    publish_deployment,
-    hostname_for_deployment_request,
-    generate_hostname_for_app,
-    match_owner,
-    skip_by_tag,
    confirm_payment,
+    deploy_to_k8s,
+    file_hash,
+    generate_hostname_for_app,
+    hostname_for_deployment_request,
    load_known_requests,
+    match_owner,
+    publish_deployment,
+    push_container_image,
+    skip_by_tag,
 )


@@ -70,9 +70,7 @@ def process_app_deployment_request(
    logger.log("BEGIN - process_app_deployment_request")

    # 1. look up application
-    app = laconic.get_record(
-        app_deployment_request.attributes.application, require=True
-    )
+    app = laconic.get_record(app_deployment_request.attributes.application, require=True)
    assert app is not None  # require=True ensures this
    logger.log(f"Retrieved app record {app_deployment_request.attributes.application}")

@@ -84,9 +82,7 @@ def process_app_deployment_request(
        if "allow" == fqdn_policy or "preexisting" == fqdn_policy:
            fqdn = requested_name
        else:
-            raise Exception(
-                f"{requested_name} is invalid: only unqualified hostnames are allowed."
-            )
+            raise Exception(f"{requested_name} is invalid: only unqualified hostnames are allowed.")
    else:
        fqdn = f"{requested_name}.{default_dns_suffix}"

@@ -108,8 +104,7 @@ def process_app_deployment_request(
            logger.log(f"Matched DnsRecord ownership: {matched_owner}")
        else:
            raise Exception(
-                "Unable to confirm ownership of DnsRecord %s for request %s"
-                % (dns_lrn, app_deployment_request.id)
+                f"Unable to confirm ownership of DnsRecord {dns_lrn} for request {app_deployment_request.id}"
            )
    elif "preexisting" == fqdn_policy:
        raise Exception(
@@ -144,7 +139,7 @@ def process_app_deployment_request(
        env_filename = tempfile.mktemp()
        with open(env_filename, "w") as file:
            for k, v in env.items():
-                file.write("%s=%s\n" % (k, shlex.quote(str(v))))
+                file.write(f"{k}={shlex.quote(str(v))}\n")

    # 5. determine new or existing deployment
    #   a. check for deployment lrn
@@ -153,8 +148,7 @@ def process_app_deployment_request(
        app_deployment_lrn = app_deployment_request.attributes.deployment
    if not app_deployment_lrn.startswith(deployment_record_namespace):
        raise Exception(
-            "Deployment LRN %s is not in a supported namespace"
-            % app_deployment_request.attributes.deployment
+            f"Deployment LRN {app_deployment_request.attributes.deployment} is not in a supported namespace"
        )

    deployment_record = laconic.get_record(app_deployment_lrn)
@@ -165,14 +159,14 @@ def process_app_deployment_request(
    # already-unique deployment id
    unique_deployment_id = hashlib.md5(fqdn.encode()).hexdigest()[:16]
    deployment_config_file = os.path.join(deployment_dir, "config.env")
-    deployment_container_tag = "laconic-webapp/%s:local" % unique_deployment_id
+    deployment_container_tag = f"laconic-webapp/{unique_deployment_id}:local"
    app_image_shared_tag = f"laconic-webapp/{app.id}:local"
    #   b. check for deployment directory (create if necessary)
    if not os.path.exists(deployment_dir):
        if deployment_record:
            raise Exception(
-                "Deployment record %s exists, but not deployment dir %s. "
-                "Please remove name." % (app_deployment_lrn, deployment_dir)
+                f"Deployment record {app_deployment_lrn} exists, but not deployment dir {deployment_dir}. "
+                "Please remove name."
            )
        logger.log(
            f"Creating webapp deployment in: {deployment_dir} "
@@ -198,11 +192,7 @@ def process_app_deployment_request(
        )
    # 6. build container (if needed)
    # TODO: add a comment that explains what this code is doing (not clear to me)
-    if (
-        not deployment_record
-        or deployment_record.attributes.application != app.id
-        or force_rebuild
-    ):
+    if not deployment_record or deployment_record.attributes.application != app.id or force_rebuild:
        needs_k8s_deploy = True
        # check if the image already exists
        shared_tag_exists = remote_image_exists(image_registry, app_image_shared_tag)
@@ -224,11 +214,9 @@ def process_app_deployment_request(
            # )
            logger.log("Tag complete")
        else:
-            extra_build_args = []  # TODO: pull from request
+            extra_build_args: list[str] = []  # TODO: pull from request
            logger.log(f"Building container image: {deployment_container_tag}")
-            build_container_image(
-                app, deployment_container_tag, extra_build_args, logger
-            )
+            build_container_image(app, deployment_container_tag, extra_build_args, logger)
            logger.log("Build complete")
            logger.log(f"Pushing container image: {deployment_container_tag}")
            push_container_image(deployment_dir, logger)
@@ -287,9 +275,7 @@ def dump_known_requests(filename, requests, status="SEEN"):

@click.command()
@click.option("--kube-config", help="Provide a config file for a k8s deployment")
-@click.option(
-    "--laconic-config", help="Provide a config file for laconicd", required=True
-)
+@click.option("--laconic-config", help="Provide a config file for laconicd", required=True)
@click.option(
    "--image-registry",
    help="Provide a container image registry url for this k8s cluster",
@@ -306,9 +292,7 @@ def dump_known_requests(filename, requests, status="SEEN"):
    is_flag=True,
    default=False,
 )
-@click.option(
-    "--state-file", help="File to store state about previously seen requests."
-)
+@click.option("--state-file", help="File to store state about previously seen requests.")
@click.option(
    "--only-update-state",
    help="Only update the state file, don't process any requests anything.",
@@ -331,9 +315,7 @@ def dump_known_requests(filename, requests, status="SEEN"):
    help="eg, lrn://laconic/deployments",
    required=True,
 )
-@click.option(
-    "--dry-run", help="Don't do anything, just report what would be done.", is_flag=True
-)
+@click.option("--dry-run", help="Don't do anything, just report what would be done.", is_flag=True)
@click.option(
    "--include-tags",
    help="Only include requests with matching tags (comma-separated).",
@@ -344,17 +326,13 @@ def dump_known_requests(filename, requests, status="SEEN"):
    help="Exclude requests with matching tags (comma-separated).",
    default="",
 )
-@click.option(
-    "--force-rebuild", help="Rebuild even if the image already exists.", is_flag=True
-)
+@click.option("--force-rebuild", help="Rebuild even if the image already exists.", is_flag=True)
@click.option(
    "--recreate-on-deploy",
    help="Remove and recreate deployments instead of updating them.",
    is_flag=True,
 )
-@click.option(
-    "--log-dir", help="Output build/deployment logs to directory.", default=None
-)
+@click.option("--log-dir", help="Output build/deployment logs to directory.", default=None)
@click.option(
    "--min-required-payment",
    help="Requests must have a minimum payment to be processed (in alnt)",
@@ -378,9 +356,7 @@ def dump_known_requests(filename, requests, status="SEEN"):
    help="The directory containing uploaded config.",
    required=True,
 )
-@click.option(
-    "--private-key-file", help="The private key for decrypting config.", required=True
-)
+@click.option("--private-key-file", help="The private key for decrypting config.", required=True)
@click.option(
    "--registry-lock-file",
    help="File path to use for registry mutex lock",
@@ -435,11 +411,7 @@ def command(  # noqa: C901
        sys.exit(2)

    if not only_update_state:
-        if (
-            not record_namespace_dns
-            or not record_namespace_deployments
-            or not dns_suffix
-        ):
+        if not record_namespace_dns or not record_namespace_deployments or not dns_suffix:
            print(
                "--dns-suffix, --record-namespace-dns, and "
                "--record-namespace-deployments are all required",
@@ -491,8 +463,7 @@ def command(  # noqa: C901

        if min_required_payment and not payment_address:
            print(
-                f"Minimum payment required, but no payment address listed "
-                f"for deployer: {lrn}.",
+                f"Minimum payment required, but no payment address listed " f"for deployer: {lrn}.",
                file=sys.stderr,
            )
            sys.exit(2)
@@ -557,26 +528,18 @@ def command(  # noqa: C901
                requested_name = r.attributes.dns
                if not requested_name:
                    requested_name = generate_hostname_for_app(app)
-                    main_logger.log(
-                        "Generating name %s for request %s." % (requested_name, r_id)
-                    )
+                    main_logger.log(f"Generating name {requested_name} for request {r_id}.")

-                if (
-                    requested_name in skipped_by_name
-                    or requested_name in requests_by_name
-                ):
-                    main_logger.log(
-                        "Ignoring request %s, it has been superseded." % r_id
-                    )
+                if requested_name in skipped_by_name or requested_name in requests_by_name:
+                    main_logger.log(f"Ignoring request {r_id}, it has been superseded.")
                    result = "SKIP"
                    continue

                if skip_by_tag(r, include_tags, exclude_tags):
                    r_tags = r.attributes.tags if r.attributes else None
                    main_logger.log(
-                        "Skipping request %s, filtered by tag "
-                        "(include %s, exclude %s, present %s)"
-                        % (r_id, include_tags, exclude_tags, r_tags)
+                        f"Skipping request {r_id}, filtered by tag "
+                        f"(include {include_tags}, exclude {exclude_tags}, present {r_tags})"
                    )
                    skipped_by_name[requested_name] = r
                    result = "SKIP"
@@ -584,8 +547,7 @@ def command(  # noqa: C901

                r_app = r.attributes.application if r.attributes else "unknown"
                main_logger.log(
-                    "Found pending request %s to run application %s on %s."
-                    % (r_id, r_app, requested_name)
+                    f"Found pending request {r_id} to run application {r_app} on {requested_name}."
                )
                requests_by_name[requested_name] = r
            except Exception as e:
@@ -617,17 +579,14 @@ def command(  # noqa: C901

        requests_to_check_for_payment = []
        for r in requests_by_name.values():
-            if r.id in cancellation_requests and match_owner(
-                cancellation_requests[r.id], r
-            ):
+            if r.id in cancellation_requests and match_owner(cancellation_requests[r.id], r):
                main_logger.log(
                    f"Found deployment cancellation request for {r.id} "
                    f"at {cancellation_requests[r.id].id}"
                )
            elif r.id in deployments_by_request:
                main_logger.log(
-                    f"Found satisfied request for {r.id} "
-                    f"at {deployments_by_request[r.id].id}"
+                    f"Found satisfied request for {r.id} " f"at {deployments_by_request[r.id].id}"
                )
            else:
                if (
@@ -635,8 +594,7 @@ def command(  # noqa: C901
                    and previous_requests[r.id].get("status", "") != "RETRY"
                ):
                    main_logger.log(
-                        f"Skipping unsatisfied request {r.id} "
-                        "because we have seen it before."
+                        f"Skipping unsatisfied request {r.id} " "because we have seen it before."
                    )
                else:
                    main_logger.log(f"Request {r.id} needs to processed.")
@@ -650,14 +608,10 @@ def command(  # noqa: C901
                        main_logger.log(f"{r.id}: Auction confirmed.")
                        requests_to_execute.append(r)
                    else:
-                        main_logger.log(
-                            f"Skipping request {r.id}: unable to verify auction."
-                        )
+                        main_logger.log(f"Skipping request {r.id}: unable to verify auction.")
                        dump_known_requests(state_file, [r], status="SKIP")
                else:
-                    main_logger.log(
-                        f"Skipping request {r.id}: not handling requests with auction."
-                    )
+                    main_logger.log(f"Skipping request {r.id}: not handling requests with auction.")
                    dump_known_requests(state_file, [r], status="SKIP")
            elif min_required_payment:
                main_logger.log(f"{r.id}: Confirming payment...")
@@ -671,16 +625,12 @@ def command(  # noqa: C901
                    main_logger.log(f"{r.id}: Payment confirmed.")
                    requests_to_execute.append(r)
                else:
-                    main_logger.log(
-                        f"Skipping request {r.id}: unable to verify payment."
-                    )
+                    main_logger.log(f"Skipping request {r.id}: unable to verify payment.")
                    dump_known_requests(state_file, [r], status="UNPAID")
            else:
                requests_to_execute.append(r)

-        main_logger.log(
-            "Found %d unsatisfied request(s) to process." % len(requests_to_execute)
-        )
+        main_logger.log(f"Found {len(requests_to_execute)} unsatisfied request(s) to process.")

        if not dry_run:
            for r in requests_to_execute:
@@ -700,10 +650,8 @@ def command(  # noqa: C901
                        if not os.path.exists(run_log_dir):
                            os.mkdir(run_log_dir)
                        run_log_file_path = os.path.join(run_log_dir, f"{run_id}.log")
-                        main_logger.log(
-                            f"Directing deployment logs to: {run_log_file_path}"
-                        )
-                        run_log_file = open(run_log_file_path, "wt")
+                        main_logger.log(f"Directing deployment logs to: {run_log_file_path}")
+                        run_log_file = open(run_log_file_path, "w")
                        run_reg_client = LaconicRegistryClient(
                            laconic_config,
                            log_file=run_log_file,
@@ -12,18 +12,18 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-import sys
 import json
+import sys

 import click

 from stack_orchestrator.deploy.webapp.util import (
+    AUCTION_KIND_PROVIDER,
    AttrDict,
+    AuctionStatus,
    LaconicRegistryClient,
    TimedLogger,
    load_known_requests,
-    AUCTION_KIND_PROVIDER,
-    AuctionStatus,
 )


@@ -44,16 +44,13 @@ def process_app_deployment_auction(

    # Check auction kind
    if auction.kind != AUCTION_KIND_PROVIDER:
-        raise Exception(
-            f"Auction kind needs to be ${AUCTION_KIND_PROVIDER}, got {auction.kind}"
-        )
+        raise Exception(f"Auction kind needs to be ${AUCTION_KIND_PROVIDER}, got {auction.kind}")

    if current_status == "PENDING":
        # Skip if pending auction not in commit state
        if auction.status != AuctionStatus.COMMIT:
            logger.log(
-                f"Skipping pending request, auction {auction_id} "
-                f"status: {auction.status}"
+                f"Skipping pending request, auction {auction_id} " f"status: {auction.status}"
            )
            return "SKIP", ""

@@ -115,9 +112,7 @@ def dump_known_auction_requests(filename, requests, status="SEEN"):


@click.command()
-@click.option(
-    "--laconic-config", help="Provide a config file for laconicd", required=True
-)
+@click.option("--laconic-config", help="Provide a config file for laconicd", required=True)
@click.option(
    "--state-file",
    help="File to store state about previously seen auction requests.",
@@ -133,9 +128,7 @@ def dump_known_auction_requests(filename, requests, status="SEEN"):
    help="File path to use for registry mutex lock",
    default=None,
 )
-@click.option(
-    "--dry-run", help="Don't do anything, just report what would be done.", is_flag=True
-)
+@click.option("--dry-run", help="Don't do anything, just report what would be done.", is_flag=True)
@click.pass_context
 def command(
    ctx,
@@ -198,8 +191,7 @@ def command(
                        continue

                    logger.log(
-                        f"Found pending auction request {r.id} for application "
-                        f"{application}."
+                        f"Found pending auction request {r.id} for application " f"{application}."
                    )

                # Add requests to be processed
@@ -209,9 +201,7 @@ def command(
                result_status = "ERROR"
                logger.log(f"ERROR: examining request {r.id}: " + str(e))
            finally:
-                logger.log(
-                    f"DONE: Examining request {r.id} with result {result_status}."
-                )
+                logger.log(f"DONE: Examining request {r.id} with result {result_status}.")
                if result_status in ["ERROR"]:
                    dump_known_auction_requests(
                        state_file,
@@ -30,9 +30,7 @@ def fatal(msg: str):


@click.command()
-@click.option(
-    "--laconic-config", help="Provide a config file for laconicd", required=True
-)
+@click.option("--laconic-config", help="Provide a config file for laconicd", required=True)
@click.option(
    "--app",
    help="The LRN of the application to deploy.",
@@ -13,28 +13,24 @@
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

 import base64
-import click
 import sys
-import yaml
-
 from urllib.parse import urlparse

+import click
+import yaml
+
 from stack_orchestrator.deploy.webapp.util import LaconicRegistryClient


@click.command()
-@click.option(
-    "--laconic-config", help="Provide a config file for laconicd", required=True
-)
+@click.option("--laconic-config", help="Provide a config file for laconicd", required=True)
@click.option("--api-url", help="The API URL of the deployer.", required=True)
@click.option(
    "--public-key-file",
    help="The public key to use.  This should be a binary file.",
    required=True,
 )
-@click.option(
-    "--lrn", help="eg, lrn://laconic/deployers/my.deployer.name", required=True
-)
+@click.option("--lrn", help="eg, lrn://laconic/deployers/my.deployer.name", required=True)
@click.option(
    "--payment-address",
    help="The address to which payments should be made.  "
@@ -84,9 +80,7 @@ def command(  # noqa: C901
    }

    if min_required_payment:
-        webapp_deployer_record["record"][
-            "minimumPayment"
-        ] = f"{min_required_payment}alnt"
+        webapp_deployer_record["record"]["minimumPayment"] = f"{min_required_payment}alnt"

    if dry_run:
        yaml.dump(webapp_deployer_record, sys.stdout)
@@ -1,6 +1,6 @@
-from functools import wraps
 import os
 import time
+from functools import wraps

 # Define default file path for the lock
 DEFAULT_LOCK_FILE_PATH = "/tmp/registry_mutex_lock_file"
@@ -17,7 +17,7 @@ def acquire_lock(client, lock_file_path, timeout):
        try:
            # Check if lock file exists and is potentially stale
            if os.path.exists(lock_file_path):
-                with open(lock_file_path, "r") as lock_file:
+                with open(lock_file_path) as lock_file:
                    timestamp = float(lock_file.read().strip())

                # If lock is stale, remove the lock file
@@ -25,9 +25,7 @@ def acquire_lock(client, lock_file_path, timeout):
                    print(f"Stale lock detected, removing lock file {lock_file_path}")
                    os.remove(lock_file_path)
                else:
-                    print(
-                        f"Lock file {lock_file_path} exists and is recent, waiting..."
-                    )
+                    print(f"Lock file {lock_file_path} exists and is recent, waiting...")
                    time.sleep(LOCK_RETRY_INTERVAL)
                    continue

@@ -12,24 +12,24 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

+import base64
 import shutil
 import sys
 import tempfile
 from datetime import datetime
 from typing import NoReturn
-import base64

-import gnupg
 import click
+import gnupg
 import requests
 import yaml
+from dotenv import dotenv_values

 from stack_orchestrator.deploy.webapp.util import (
    AUCTION_KIND_PROVIDER,
    AuctionStatus,
    LaconicRegistryClient,
 )
-from dotenv import dotenv_values


 def fatal(msg: str) -> NoReturn:
@@ -38,9 +38,7 @@ def fatal(msg: str) -> NoReturn:


@click.command()
-@click.option(
-    "--laconic-config", help="Provide a config file for laconicd", required=True
-)
+@click.option("--laconic-config", help="Provide a config file for laconicd", required=True)
@click.option(
    "--app",
    help="The LRN of the application to deploy.",
@@ -63,9 +61,7 @@ def fatal(msg: str) -> NoReturn:
        "'auto' to use the deployer's minimum required payment."
    ),
 )
-@click.option(
-    "--use-payment", help="The TX id of an existing, unused payment", default=None
-)
+@click.option("--use-payment", help="The TX id of an existing, unused payment", default=None)
@click.option("--dns", help="the DNS name to request (default is autogenerated)")
@click.option(
    "--dry-run",
@@ -144,9 +140,7 @@ def command(  # noqa: C901
        # Check auction kind
        auction_kind = auction.kind if auction else None
        if auction_kind != AUCTION_KIND_PROVIDER:
-            fatal(
-                f"Auction kind needs to be ${AUCTION_KIND_PROVIDER}, got {auction_kind}"
-            )
+            fatal(f"Auction kind needs to be ${AUCTION_KIND_PROVIDER}, got {auction_kind}")

        # Check auction status
        auction_status = auction.status if auction else None
@@ -163,14 +157,9 @@ def command(  # noqa: C901
        # Get deployer record for all the auction winners
        for auction_winner in auction_winners:
            # TODO: Match auction winner address with provider address?
-            deployer_records_by_owner = laconic.webapp_deployers(
-                {"paymentAddress": auction_winner}
-            )
+            deployer_records_by_owner = laconic.webapp_deployers({"paymentAddress": auction_winner})
            if len(deployer_records_by_owner) == 0:
-                print(
-                    f"WARNING: Unable to locate deployer for auction winner "
-                    f"{auction_winner}"
-                )
+                print(f"WARNING: Unable to locate deployer for auction winner " f"{auction_winner}")

            # Take first record with name set
            target_deployer_record = deployer_records_by_owner[0]
@@ -196,9 +185,7 @@ def command(  # noqa: C901
                gpg = gnupg.GPG(gnupghome=tempdir)

                # Import the deployer's public key
-                result = gpg.import_keys(
-                    base64.b64decode(deployer_record.attributes.publicKey)
-                )
+                result = gpg.import_keys(base64.b64decode(deployer_record.attributes.publicKey))
                if 1 != result.imported:
                    fatal("Failed to import deployer's public key.")

@@ -237,15 +224,9 @@ def command(  # noqa: C901
        if (not deployer) and len(deployer_record.names):
            target_deployer = deployer_record.names[0]

-        app_name = (
-            app_record.attributes.name
-            if app_record and app_record.attributes
-            else "unknown"
-        )
+        app_name = app_record.attributes.name if app_record and app_record.attributes else "unknown"
        app_version = (
-            app_record.attributes.version
-            if app_record and app_record.attributes
-            else "unknown"
+            app_record.attributes.version if app_record and app_record.attributes else "unknown"
        )
        deployment_request = {
            "record": {
@@ -273,15 +254,11 @@ def command(  # noqa: C901
                deployment_request["record"]["payment"] = "DRY_RUN"
            elif "auto" == make_payment:
                if "minimumPayment" in deployer_record.attributes:
-                    amount = int(
-                        deployer_record.attributes.minimumPayment.replace("alnt", "")
-                    )
+                    amount = int(deployer_record.attributes.minimumPayment.replace("alnt", ""))
            else:
                amount = make_payment
            if amount:
-                receipt = laconic.send_tokens(
-                    deployer_record.attributes.paymentAddress, amount
-                )
+                receipt = laconic.send_tokens(deployer_record.attributes.paymentAddress, amount)
                deployment_request["record"]["payment"] = receipt.tx.hash
                print("Payment TX:", receipt.tx.hash)
        elif use_payment:
@@ -26,12 +26,8 @@ def fatal(msg: str) -> None:


@click.command()
-@click.option(
-    "--laconic-config", help="Provide a config file for laconicd", required=True
-)
-@click.option(
-    "--deployer", help="The LRN of the deployer to process this request.", required=True
-)
+@click.option("--laconic-config", help="Provide a config file for laconicd", required=True)
+@click.option("--deployer", help="The LRN of the deployer to process this request.", required=True)
@click.option(
    "--deployment",
    help="Deployment record (ApplicationDeploymentRecord) id of the deployment.",
@@ -44,9 +40,7 @@ def fatal(msg: str) -> None:
        "'auto' to use the deployer's minimum required payment."
    ),
 )
-@click.option(
-    "--use-payment", help="The TX id of an existing, unused payment", default=None
-)
+@click.option("--use-payment", help="The TX id of an existing, unused payment", default=None)
@click.option(
    "--dry-run",
    help="Don't publish anything, just report what would be done.",
@@ -22,6 +22,7 @@
 # all or specific containers

 import hashlib
+
 import click
 from dotenv import dotenv_values

@@ -21,11 +21,11 @@ import sys
 import click

 from stack_orchestrator.deploy.webapp.util import (
-    TimedLogger,
    LaconicRegistryClient,
+    TimedLogger,
+    confirm_payment,
    match_owner,
    skip_by_tag,
-    confirm_payment,
 )

 main_logger = TimedLogger(file=sys.stderr)
@@ -40,9 +40,7 @@ def process_app_removal_request(
    delete_names,
    webapp_deployer_record,
 ):
-    deployment_record = laconic.get_record(
-        app_removal_request.attributes.deployment, require=True
-    )
+    deployment_record = laconic.get_record(app_removal_request.attributes.deployment, require=True)
    assert deployment_record is not None  # require=True ensures this
    assert deployment_record.attributes is not None

@@ -50,12 +48,10 @@ def process_app_removal_request(
    assert dns_record is not None  # require=True ensures this
    assert dns_record.attributes is not None

-    deployment_dir = os.path.join(
-        deployment_parent_dir, dns_record.attributes.name.lower()
-    )
+    deployment_dir = os.path.join(deployment_parent_dir, dns_record.attributes.name.lower())

    if not os.path.exists(deployment_dir):
-        raise Exception("Deployment directory %s does not exist." % deployment_dir)
+        raise Exception(f"Deployment directory {deployment_dir} does not exist.")

    # Check if the removal request is from the owner of the DnsRecord or
    # deployment record.
@@ -63,9 +59,7 @@ def process_app_removal_request(

    # Or of the original deployment request.
    if not matched_owner and deployment_record.attributes.request:
-        original_request = laconic.get_record(
-            deployment_record.attributes.request, require=True
-        )
+        original_request = laconic.get_record(deployment_record.attributes.request, require=True)
        assert original_request is not None  # require=True ensures this
        matched_owner = match_owner(app_removal_request, original_request)

@@ -75,8 +69,7 @@ def process_app_removal_request(
        deployment_id = deployment_record.id if deployment_record else "unknown"
        request_id = app_removal_request.id if app_removal_request else "unknown"
        raise Exception(
-            "Unable to confirm ownership of deployment %s for removal request %s"
-            % (deployment_id, request_id)
+            f"Unable to confirm ownership of deployment {deployment_id} for removal request {request_id}"
        )

    # TODO(telackey): Call the function directly. The easiest way to build
@@ -124,7 +117,7 @@ def process_app_removal_request(

 def load_known_requests(filename):
    if filename and os.path.exists(filename):
-        return json.load(open(filename, "r"))
+        return json.load(open(filename))
    return {}


@@ -138,9 +131,7 @@ def dump_known_requests(filename, requests):


@click.command()
-@click.option(
-    "--laconic-config", help="Provide a config file for laconicd", required=True
-)
+@click.option("--laconic-config", help="Provide a config file for laconicd", required=True)
@click.option(
    "--deployment-parent-dir",
    help="Create deployment directories beneath this directory",
@@ -153,9 +144,7 @@ def dump_known_requests(filename, requests):
    is_flag=True,
    default=False,
 )
-@click.option(
-    "--state-file", help="File to store state about previously seen requests."
-)
+@click.option("--state-file", help="File to store state about previously seen requests.")
@click.option(
    "--only-update-state",
    help="Only update the state file, don't process any requests anything.",
@@ -166,12 +155,8 @@ def dump_known_requests(filename, requests):
    help="Delete all names associated with removed deployments.",
    default=True,
 )
-@click.option(
-    "--delete-volumes/--preserve-volumes", default=True, help="delete data volumes"
-)
-@click.option(
-    "--dry-run", help="Don't do anything, just report what would be done.", is_flag=True
-)
+@click.option("--delete-volumes/--preserve-volumes", default=True, help="delete data volumes")
+@click.option("--dry-run", help="Don't do anything, just report what would be done.", is_flag=True)
@click.option(
    "--include-tags",
    help="Only include requests with matching tags (comma-separated).",
@@ -245,8 +230,7 @@ def command(  # noqa: C901

    if min_required_payment and not payment_address:
        print(
-            f"Minimum payment required, but no payment address listed "
-            f"for deployer: {lrn}.",
+            f"Minimum payment required, but no payment address listed " f"for deployer: {lrn}.",
            file=sys.stderr,
        )
        sys.exit(2)
@@ -303,9 +287,7 @@ def command(  # noqa: C901
            continue
        if not r.attributes.deployment:
            r_id = r.id if r else "unknown"
-            main_logger.log(
-                f"Skipping removal request {r_id} since it was a cancellation."
-            )
+            main_logger.log(f"Skipping removal request {r_id} since it was a cancellation.")
        elif r.attributes.deployment in one_per_deployment:
            r_id = r.id if r else "unknown"
            main_logger.log(f"Skipping removal request {r_id} since it was superseded.")
@@ -323,14 +305,12 @@ def command(  # noqa: C901
                )
            elif skip_by_tag(r, include_tags, exclude_tags):
                main_logger.log(
-                    "Skipping removal request %s, filtered by tag "
-                    "(include %s, exclude %s, present %s)"
-                    % (r.id, include_tags, exclude_tags, r.attributes.tags)
+                    f"Skipping removal request {r.id}, filtered by tag "
+                    f"(include {include_tags}, exclude {exclude_tags}, present {r.attributes.tags})"
                )
            elif r.id in removals_by_request:
                main_logger.log(
-                    f"Found satisfied request for {r.id} "
-                    f"at {removals_by_request[r.id].id}"
+                    f"Found satisfied request for {r.id} " f"at {removals_by_request[r.id].id}"
                )
            elif r.attributes.deployment in removals_by_deployment:
                main_logger.log(
@@ -344,8 +324,7 @@ def command(  # noqa: C901
                    requests_to_check_for_payment.append(r)
                else:
                    main_logger.log(
-                        f"Skipping unsatisfied request {r.id} "
-                        "because we have seen it before."
+                        f"Skipping unsatisfied request {r.id} " "because we have seen it before."
                    )
        except Exception as e:
            main_logger.log(f"ERROR examining {r.id}: {e}")
@@ -370,9 +349,7 @@ def command(  # noqa: C901
    else:
        requests_to_execute = requests_to_check_for_payment

-    main_logger.log(
-        "Found %d unsatisfied request(s) to process." % len(requests_to_execute)
-    )
+    main_logger.log(f"Found {len(requests_to_execute)} unsatisfied request(s) to process.")

    if not dry_run:
        for r in requests_to_execute:
@@ -22,10 +22,10 @@ import subprocess
 import sys
 import tempfile
 import uuid
-import yaml
-
 from enum import Enum
-from typing import Any, List, Optional, TextIO
+from typing import Any, TextIO
+
+import yaml

 from stack_orchestrator.deploy.webapp.registry_mutex import registry_mutex

@@ -43,17 +43,17 @@ AUCTION_KIND_PROVIDER = "provider"

 class AttrDict(dict):
    def __init__(self, *args: Any, **kwargs: Any) -> None:
-        super(AttrDict, self).__init__(*args, **kwargs)
+        super().__init__(*args, **kwargs)
        self.__dict__ = self

    def __getattribute__(self, attr: str) -> Any:
-        __dict__ = super(AttrDict, self).__getattribute__("__dict__")
+        __dict__ = super().__getattribute__("__dict__")
        if attr in __dict__:
-            v = super(AttrDict, self).__getattribute__(attr)
+            v = super().__getattribute__(attr)
            if isinstance(v, dict):
                return AttrDict(v)
            return v
-        return super(AttrDict, self).__getattribute__(attr)
+        return super().__getattribute__(attr)

    def __getattr__(self, attr: str) -> Any:
        # This method is called when attribute is not found
@@ -62,15 +62,13 @@ class AttrDict(dict):


 class TimedLogger:
-    def __init__(self, id: str = "", file: Optional[TextIO] = None) -> None:
+    def __init__(self, id: str = "", file: TextIO | None = None) -> None:
        self.start = datetime.datetime.now()
        self.last = self.start
        self.id = id
        self.file = file

-    def log(
-        self, msg: str, show_step_time: bool = True, show_total_time: bool = False
-    ) -> None:
+    def log(self, msg: str, show_step_time: bool = True, show_total_time: bool = False) -> None:
        prefix = f"{datetime.datetime.utcnow()} - {self.id}"
        if show_step_time:
            prefix += f" - {datetime.datetime.now() - self.last} (step)"
@@ -84,11 +82,11 @@ class TimedLogger:

 def load_known_requests(filename):
    if filename and os.path.exists(filename):
-        return json.load(open(filename, "r"))
+        return json.load(open(filename))
    return {}


-def logged_cmd(log_file: Optional[TextIO], *vargs: str) -> str:
+def logged_cmd(log_file: TextIO | None, *vargs: str) -> str:
    result = None
    try:
        if log_file:
@@ -105,15 +103,14 @@ def logged_cmd(log_file: Optional[TextIO], *vargs: str) -> str:
        raise err


-def match_owner(
-    recordA: Optional[AttrDict], *records: Optional[AttrDict]
-) -> Optional[str]:
+def match_owner(recordA: AttrDict | None, *records: AttrDict | None) -> str | None:
    if not recordA or not recordA.owners:
        return None
    for owner in recordA.owners:
        for otherRecord in records:
            if otherRecord and otherRecord.owners and owner in otherRecord.owners:
-                return owner
+                result: str | None = owner
+                return result
    return None


@@ -147,9 +144,7 @@ class LaconicRegistryClient:
            return self.cache["whoami"]

        args = ["laconic", "-c", self.config_file, "registry", "account", "get"]
-        results = [
-            AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r
-        ]
+        results = [AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r]

        if len(results):
            self.cache["whoami"] = results[0]
@@ -178,9 +173,7 @@ class LaconicRegistryClient:
            "--address",
            address,
        ]
-        results = [
-            AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r
-        ]
+        results = [AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r]
        if len(results):
            self.cache["accounts"][address] = results[0]
            return results[0]
@@ -203,9 +196,7 @@ class LaconicRegistryClient:
            "--id",
            id,
        ]
-        results = [
-            AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r
-        ]
+        results = [AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r]
        self._add_to_cache(results)
        if len(results):
            return results[0]
@@ -216,9 +207,7 @@ class LaconicRegistryClient:

    def list_bonds(self):
        args = ["laconic", "-c", self.config_file, "registry", "bond", "list"]
-        results = [
-            AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r
-        ]
+        results = [AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r]
        self._add_to_cache(results)
        return results

@@ -232,12 +221,10 @@ class LaconicRegistryClient:

        if criteria:
            for k, v in criteria.items():
-                args.append("--%s" % k)
+                args.append(f"--{k}")
                args.append(str(v))

-        results = [
-            AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r
-        ]
+        results = [AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r]

        # Most recent records first
        results.sort(key=lambda r: r.createTime or "")
@@ -246,7 +233,7 @@ class LaconicRegistryClient:

        return results

-    def _add_to_cache(self, records: List[AttrDict]) -> None:
+    def _add_to_cache(self, records: list[AttrDict]) -> None:
        if not records:
            return

@@ -271,9 +258,7 @@ class LaconicRegistryClient:

        args = ["laconic", "-c", self.config_file, "registry", "name", "resolve", name]

-        parsed = [
-            AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r
-        ]
+        parsed = [AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r]
        if parsed:
            self._add_to_cache(parsed)
            return parsed[0]
@@ -303,9 +288,7 @@ class LaconicRegistryClient:
            name_or_id,
        ]

-        parsed = [
-            AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r
-        ]
+        parsed = [AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r]
        if len(parsed):
            self._add_to_cache(parsed)
            return parsed[0]
@@ -356,9 +339,7 @@ class LaconicRegistryClient:

        results = None
        try:
-            results = [
-                AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r
-            ]
+            results = [AttrDict(r) for r in json.loads(logged_cmd(self.log_file, *args)) if r]
        except:  # noqa: E722
            pass

@@ -422,7 +403,7 @@ class LaconicRegistryClient:
            record_file = open(record_fname, "w")
            yaml.dump(record, record_file)
            record_file.close()
-            print(open(record_fname, "r").read(), file=self.log_file)
+            print(open(record_fname).read(), file=self.log_file)

            new_record_id = json.loads(
                logged_cmd(
@@ -573,10 +554,10 @@ def determine_base_container(clone_dir, app_type="webapp"):


 def build_container_image(
-    app_record: Optional[AttrDict],
+    app_record: AttrDict | None,
    tag: str,
-    extra_build_args: Optional[List[str]] = None,
-    logger: Optional[TimedLogger] = None,
+    extra_build_args: list[str] | None = None,
+    logger: TimedLogger | None = None,
 ) -> None:
    if app_record is None:
        raise ValueError("app_record cannot be None")
@@ -649,9 +630,7 @@ def build_container_image(
            )
            result.check_returncode()

-        base_container = determine_base_container(
-            clone_dir, app_record.attributes.app_type
-        )
+        base_container = determine_base_container(clone_dir, app_record.attributes.app_type)

        if logger:
            logger.log("Building webapp ...")
@@ -696,7 +675,7 @@ def deploy_to_k8s(deploy_record, deployment_dir, recreate, logger):
        if not deploy_record:
            commands_to_run = ["start"]
        else:
-            commands_to_run = ["update"]
+            commands_to_run = ["update-envs"]

    for command in commands_to_run:
        logger.log(f"Running {command} command on deployment dir: {deployment_dir}")
@@ -727,14 +706,12 @@ def publish_deployment(
    if not deploy_record:
        deploy_ver = "0.0.1"
    else:
-        deploy_ver = "0.0.%d" % (
-            int(deploy_record.attributes.version.split(".")[-1]) + 1
-        )
+        deploy_ver = f"0.0.{int(deploy_record.attributes.version.split('.')[-1]) + 1}"

    if not dns_record:
        dns_ver = "0.0.1"
    else:
-        dns_ver = "0.0.%d" % (int(dns_record.attributes.version.split(".")[-1]) + 1)
+        dns_ver = f"0.0.{int(dns_record.attributes.version.split('.')[-1]) + 1}"

    spec = yaml.full_load(open(os.path.join(deployment_dir, "spec.yml")))
    fqdn = spec["network"]["http-proxy"][0]["host-name"]
@@ -779,13 +756,9 @@ def publish_deployment(

        # Set auction or payment id from request
        if app_deployment_request.attributes.auction:
-            new_deployment_record["record"][
-                "auction"
-            ] = app_deployment_request.attributes.auction
+            new_deployment_record["record"]["auction"] = app_deployment_request.attributes.auction
        elif app_deployment_request.attributes.payment:
-            new_deployment_record["record"][
-                "payment"
-            ] = app_deployment_request.attributes.payment
+            new_deployment_record["record"]["payment"] = app_deployment_request.attributes.payment

    if webapp_deployer_record:
        new_deployment_record["record"]["deployer"] = webapp_deployer_record.names[0]
@@ -799,9 +772,7 @@ def publish_deployment(
 def hostname_for_deployment_request(app_deployment_request, laconic):
    dns_name = app_deployment_request.attributes.dns
    if not dns_name:
-        app = laconic.get_record(
-            app_deployment_request.attributes.application, require=True
-        )
+        app = laconic.get_record(app_deployment_request.attributes.application, require=True)
        dns_name = generate_hostname_for_app(app)
    elif dns_name.startswith("lrn://"):
        record = laconic.get_record(dns_name, require=True)
@@ -818,7 +789,7 @@ def generate_hostname_for_app(app):
        m.update(app.attributes.repository[0].encode())
    else:
        m.update(app.attributes.repository.encode())
-    return "%s-%s" % (last_part, m.hexdigest()[0:10])
+    return f"{last_part}-{m.hexdigest()[0:10]}"


 def skip_by_tag(r, include_tags, exclude_tags):
@@ -881,16 +852,13 @@ def confirm_payment(
    pay_denom = "".join([i for i in tx_amount if not i.isdigit()])
    if pay_denom != "alnt":
        logger.log(
-            f"{record.id}: {pay_denom} in tx {tx.hash} is not an expected "
-            "payment denomination"
+            f"{record.id}: {pay_denom} in tx {tx.hash} is not an expected " "payment denomination"
        )
        return False

    pay_amount = int("".join([i for i in tx_amount if i.isdigit()]) or "0")
    if pay_amount < min_amount:
-        logger.log(
-            f"{record.id}: payment amount {tx.amount} is less than minimum {min_amount}"
-        )
+        logger.log(f"{record.id}: payment amount {tx.amount} is less than minimum {min_amount}")
        return False

    # Check if the payment was already used on a deployment
@@ -914,9 +882,7 @@ def confirm_payment(
        {"deployer": record.attributes.deployer, "payment": tx.hash}, all=True
    )
    if len(used):
-        logger.log(
-            f"{record.id}: payment {tx.hash} already used on deployment removal {used}"
-        )
+        logger.log(f"{record.id}: payment {tx.hash} already used on deployment removal {used}")
        return False

    return True
@@ -940,9 +906,7 @@ def confirm_auction(

    # Cross check app against application in the auction record
    requested_app = laconic.get_record(record.attributes.application, require=True)
-    auction_app = laconic.get_record(
-        auction_records_by_id[0].attributes.application, require=True
-    )
+    auction_app = laconic.get_record(auction_records_by_id[0].attributes.application, require=True)
    requested_app_id = requested_app.id if requested_app else None
    auction_app_id = auction_app.id if auction_app else None
    if requested_app_id != auction_app_id:
@@ -15,30 +15,24 @@

 import click

+from stack_orchestrator import opts, update, version
+from stack_orchestrator.build import build_containers, build_npms, build_webapp, fetch_containers
 from stack_orchestrator.command_types import CommandOptions
-from stack_orchestrator.repos import setup_repositories
-from stack_orchestrator.repos import fetch_stack
-from stack_orchestrator.build import build_containers, fetch_containers
-from stack_orchestrator.build import build_npms
-from stack_orchestrator.build import build_webapp
+from stack_orchestrator.deploy import deploy, deployment
 from stack_orchestrator.deploy.webapp import (
-    run_webapp,
    deploy_webapp,
    deploy_webapp_from_registry,
-    undeploy_webapp_from_registry,
-    publish_webapp_deployer,
-    publish_deployment_auction,
    handle_deployment_auction,
+    publish_deployment_auction,
+    publish_webapp_deployer,
    request_webapp_deployment,
    request_webapp_undeployment,
+    run_webapp,
+    undeploy_webapp_from_registry,
 )
-from stack_orchestrator.deploy import deploy
-from stack_orchestrator import version
-from stack_orchestrator.deploy import deployment
-from stack_orchestrator import opts
-from stack_orchestrator import update
+from stack_orchestrator.repos import fetch_stack, setup_repositories

-CONTEXT_SETTINGS = dict(help_option_names=["-h", "--help"])
+CONTEXT_SETTINGS = {"help_option_names": ["-h", "--help"]}


@click.group(context_settings=CONTEXT_SETTINGS)
@@ -17,9 +17,9 @@
 # CERC_REPO_BASE_DIR defaults to ~/cerc


-import click
 import os

+import click
 from decouple import config
 from git import exc

@@ -36,9 +36,7 @@ from stack_orchestrator.util import error_exit
@click.pass_context
 def command(ctx, stack_locator, git_ssh, check_only, pull):
    """Optionally resolve then git clone a repository with stack definitions."""
-    dev_root_path = os.path.expanduser(
-        str(config("CERC_REPO_BASE_DIR", default="~/cerc"))
-    )
+    dev_root_path = os.path.expanduser(str(config("CERC_REPO_BASE_DIR", default="~/cerc")))
    if not opts.o.quiet:
        print(f"Dev Root is: {dev_root_path}")
    try:
@@ -16,20 +16,22 @@
 # env vars:
 # CERC_REPO_BASE_DIR defaults to ~/cerc

+import importlib.resources
 import os
 import sys
-from decouple import config
-import git
-from git.exc import GitCommandError, InvalidGitRepositoryError
 from typing import Any
-from tqdm import tqdm
+
 import click
-import importlib.resources
+import git
+from decouple import config
+from git.exc import GitCommandError, InvalidGitRepositoryError
+from tqdm import tqdm
+
 from stack_orchestrator.opts import opts
 from stack_orchestrator.util import (
+    error_exit,
    get_parsed_stack_config,
    include_exclude_check,
-    error_exit,
    warn_exit,
 )

@@ -86,48 +88,38 @@ def _get_repo_current_branch_or_tag(full_filesystem_repo_path):
    current_repo_branch_or_tag = "***UNDETERMINED***"
    is_branch = False
    try:
-        current_repo_branch_or_tag = git.Repo(
-            full_filesystem_repo_path
-        ).active_branch.name
+        current_repo_branch_or_tag = git.Repo(full_filesystem_repo_path).active_branch.name
        is_branch = True
    except TypeError:
        # This means that the current ref is not a branch, so possibly a tag
        # Let's try to get the tag
        try:
-            current_repo_branch_or_tag = git.Repo(
-                full_filesystem_repo_path
-            ).git.describe("--tags", "--exact-match")
+            current_repo_branch_or_tag = git.Repo(full_filesystem_repo_path).git.describe(
+                "--tags", "--exact-match"
+            )
            # Note that git is asymmetric -- the tag you told it to check out
            # may not be the one you get back here (if there are multiple tags
            # associated with the same commit)
        except GitCommandError:
            # If there is no matching branch or tag checked out, just use the current
            # SHA
-            current_repo_branch_or_tag = (
-                git.Repo(full_filesystem_repo_path).commit("HEAD").hexsha
-            )
+            current_repo_branch_or_tag = git.Repo(full_filesystem_repo_path).commit("HEAD").hexsha
    return current_repo_branch_or_tag, is_branch


 # TODO: fix the messy arg list here
-def process_repo(
-    pull, check_only, git_ssh, dev_root_path, branches_array, fully_qualified_repo
-):
+def process_repo(pull, check_only, git_ssh, dev_root_path, branches_array, fully_qualified_repo):
    if opts.o.verbose:
        print(f"Processing repo: {fully_qualified_repo}")
    repo_host, repo_path, repo_branch = host_and_path_for_repo(fully_qualified_repo)
    git_ssh_prefix = f"git@{repo_host}:"
    git_http_prefix = f"https://{repo_host}/"
-    full_github_repo_path = (
-        f"{git_ssh_prefix if git_ssh else git_http_prefix}{repo_path}"
-    )
+    full_github_repo_path = f"{git_ssh_prefix if git_ssh else git_http_prefix}{repo_path}"
    repoName = repo_path.split("/")[-1]
    full_filesystem_repo_path = os.path.join(dev_root_path, repoName)
    is_present = os.path.isdir(full_filesystem_repo_path)
    (current_repo_branch_or_tag, is_branch) = (
-        _get_repo_current_branch_or_tag(full_filesystem_repo_path)
-        if is_present
-        else (None, None)
+        _get_repo_current_branch_or_tag(full_filesystem_repo_path) if is_present else (None, None)
    )
    if not opts.o.quiet:
        present_text = (
@@ -140,10 +132,7 @@ def process_repo(
    # Quick check that it's actually a repo
    if is_present:
        if not is_git_repo(full_filesystem_repo_path):
-            print(
-                f"Error: {full_filesystem_repo_path} does not contain "
-                "a valid git repository"
-            )
+            print(f"Error: {full_filesystem_repo_path} does not contain " "a valid git repository")
            sys.exit(1)
        else:
            if pull:
@@ -190,8 +179,7 @@ def process_repo(

    if branch_to_checkout:
        if current_repo_branch_or_tag is None or (
-            current_repo_branch_or_tag
-            and (current_repo_branch_or_tag != branch_to_checkout)
+            current_repo_branch_or_tag and (current_repo_branch_or_tag != branch_to_checkout)
        ):
            if not opts.o.quiet:
                print(f"switching to branch {branch_to_checkout} in repo {repo_path}")
@@ -245,14 +233,9 @@ def command(ctx, include, exclude, git_ssh, check_only, pull, branches):

    if local_stack:
        dev_root_path = os.getcwd()[0 : os.getcwd().rindex("stack-orchestrator")]
-        print(
-            f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: "
-            f"{dev_root_path}"
-        )
+        print(f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: " f"{dev_root_path}")
    else:
-        dev_root_path = os.path.expanduser(
-            str(config("CERC_REPO_BASE_DIR", default="~/cerc"))
-        )
+        dev_root_path = os.path.expanduser(str(config("CERC_REPO_BASE_DIR", default="~/cerc")))

    if not quiet:
        print(f"Dev Root is: {dev_root_path}")
@@ -265,9 +248,7 @@ def command(ctx, include, exclude, git_ssh, check_only, pull, branches):
    # See: https://stackoverflow.com/a/20885799/1701505
    from stack_orchestrator import data

-    with importlib.resources.open_text(
-        data, "repository-list.txt"
-    ) as repository_list_file:
+    with importlib.resources.open_text(data, "repository-list.txt") as repository_list_file:
        all_repos = repository_list_file.read().splitlines()

    repos_in_scope = []
@@ -13,16 +13,18 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-import click
 import datetime
 import filecmp
 import os
-from pathlib import Path
-import requests
-import sys
-import stat
 import shutil
+import stat
+import sys
+from pathlib import Path
+
+import click
+import requests
 import validators
+
 from stack_orchestrator.util import get_yaml


@@ -40,9 +42,7 @@ def _error_exit(s: str):

 # Note at present this probably won't work on non-Unix based OSes like Windows
@click.command()
-@click.option(
-    "--check-only", is_flag=True, default=False, help="only check, don't update"
-)
+@click.option("--check-only", is_flag=True, default=False, help="only check, don't update")
@click.pass_context
 def command(ctx, check_only):
    """update shiv binary from a distribution url"""
@@ -52,7 +52,7 @@ def command(ctx, check_only):
    if not config_file_path.exists():
        _error_exit(f"Error: Config file: {config_file_path} not found")
    yaml = get_yaml()
-    config = yaml.load(open(config_file_path, "r"))
+    config = yaml.load(open(config_file_path))
    if "distribution-url" not in config:
        _error_exit(f"Error: {config_key} not defined in {config_file_path}")
    distribution_url = config[config_key]
@@ -61,9 +61,7 @@ def command(ctx, check_only):
        _error_exit(f"ERROR: distribution url: {distribution_url} is not valid")
    # Figure out the filename for ourselves
    shiv_binary_path = Path(sys.argv[0])
-    timestamp_filename = (
-        f"laconic-so-download-{datetime.datetime.now().strftime('%y%m%d-%H%M%S')}"
-    )
+    timestamp_filename = f"laconic-so-download-{datetime.datetime.now().strftime('%y%m%d-%H%M%S')}"
    temp_download_path = shiv_binary_path.parent.joinpath(timestamp_filename)
    # Download the file to a temp filename
    if ctx.obj.verbose:
@@ -13,14 +13,17 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

-from decouple import config
 import os.path
 import sys
-import ruamel.yaml
+from collections.abc import Mapping
 from pathlib import Path
+from typing import NoReturn
+
+import ruamel.yaml
+from decouple import config
 from dotenv import dotenv_values
-from typing import Mapping, NoReturn, Optional, Set, List
-from stack_orchestrator.constants import stack_file_name, deployment_file_name
+
+from stack_orchestrator.constants import deployment_file_name, stack_file_name


 def include_exclude_check(s, include, exclude):
@@ -50,14 +53,9 @@ def get_dev_root_path(ctx):
    if ctx and ctx.local_stack:
        # TODO: This code probably doesn't work
        dev_root_path = os.getcwd()[0 : os.getcwd().rindex("stack-orchestrator")]
-        print(
-            f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: "
-            f"{dev_root_path}"
-        )
+        print(f"Local stack dev_root_path (CERC_REPO_BASE_DIR) overridden to: " f"{dev_root_path}")
    else:
-        dev_root_path = os.path.expanduser(
-            str(config("CERC_REPO_BASE_DIR", default="~/cerc"))
-        )
+        dev_root_path = os.path.expanduser(str(config("CERC_REPO_BASE_DIR", default="~/cerc")))
    return dev_root_path


@@ -65,7 +63,7 @@ def get_dev_root_path(ctx):
 def get_parsed_stack_config(stack):
    stack_file_path = get_stack_path(stack).joinpath(stack_file_name)
    if stack_file_path.exists():
-        return get_yaml().load(open(stack_file_path, "r"))
+        return get_yaml().load(open(stack_file_path))
    # We try here to generate a useful diagnostic error
    # First check if the stack directory is present
    if stack_file_path.parent.exists():
@@ -75,8 +73,6 @@ def get_parsed_stack_config(stack):

 def get_pod_list(parsed_stack):
    # Handle both old and new format
-    if "pods" not in parsed_stack or not parsed_stack["pods"]:
-        return []
    pods = parsed_stack["pods"]
    if type(pods[0]) is str:
        result = pods
@@ -103,10 +99,10 @@ def get_job_list(parsed_stack):
    return result


-def get_plugin_code_paths(stack) -> List[Path]:
+def get_plugin_code_paths(stack) -> list[Path]:
    parsed_stack = get_parsed_stack_config(stack)
-    pods = parsed_stack.get("pods") or []
-    result: Set[Path] = set()
+    pods = parsed_stack["pods"]
+    result: set[Path] = set()
    for pod in pods:
        if type(pod) is str:
            result.add(get_stack_path(stack))
@@ -155,16 +151,15 @@ def resolve_job_compose_file(stack, job_name: str):
        if proposed_file.exists():
            return proposed_file
        # If we don't find it fall through to the internal case
-    data_dir = Path(__file__).absolute().parent.joinpath("data")
-    compose_jobs_base = data_dir.joinpath("compose-jobs")
+    # TODO: Add internal compose-jobs directory support if needed
+    # For now, jobs are expected to be in external stacks only
+    compose_jobs_base = Path(stack).parent.parent.joinpath("compose-jobs")
    return compose_jobs_base.joinpath(f"docker-compose-{job_name}.yml")


 def get_pod_file_path(stack, parsed_stack, pod_name: str):
-    pods = parsed_stack.get("pods") or []
+    pods = parsed_stack["pods"]
    result = None
-    if not pods:
-        return result
    if type(pods[0]) is str:
        result = resolve_compose_file(stack, pod_name)
    else:
@@ -192,9 +187,9 @@ def get_job_file_path(stack, parsed_stack, job_name: str):


 def get_pod_script_paths(parsed_stack, pod_name: str):
-    pods = parsed_stack.get("pods") or []
+    pods = parsed_stack["pods"]
    result = []
-    if not pods or not type(pods[0]) is str:
+    if type(pods[0]) is not str:
        for pod in pods:
            if pod["name"] == pod_name:
                pod_root_dir = os.path.join(
@@ -210,9 +205,9 @@ def get_pod_script_paths(parsed_stack, pod_name: str):


 def pod_has_scripts(parsed_stack, pod_name: str):
-    pods = parsed_stack.get("pods") or []
+    pods = parsed_stack["pods"]
    result = False
-    if not pods or type(pods[0]) is str:
+    if type(pods[0]) is str:
        result = False
    else:
        for pod in pods:
@@ -246,7 +241,7 @@ def get_k8s_dir():
 def get_parsed_deployment_spec(spec_file):
    spec_file_path = Path(spec_file)
    try:
-        return get_yaml().load(open(spec_file_path, "r"))
+        return get_yaml().load(open(spec_file_path))
    except FileNotFoundError as error:
        # We try here to generate a useful diagnostic error
        print(f"Error: spec file: {spec_file_path} does not exist")
@@ -296,5 +291,6 @@ def warn_exit(s) -> NoReturn:
    sys.exit(0)


-def env_var_map_from_file(file: Path) -> Mapping[str, Optional[str]]:
-    return dotenv_values(file)
+def env_var_map_from_file(file: Path) -> Mapping[str, str | None]:
+    result: Mapping[str, str | None] = dotenv_values(file)
+    return result
@@ -13,8 +13,9 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program.  If not, see <http:#www.gnu.org/licenses/>.

+from importlib import metadata, resources
+
 import click
-from importlib import resources, metadata


@click.command()
@@ -141,35 +141,28 @@ echo "$test_config_file_changed_content" > "$test_config_file"
 test_unchanged_config="$test_deployment_dir/config/test/script.sh"

 # Modify spec file to simulate an update
-sed -i.bak 's/CERC_TEST_PARAM_3: FAST/CERC_TEST_PARAM_3: FASTER/' $test_deployment_spec
+sed -i.bak 's/CERC_TEST_PARAM_3:/CERC_TEST_PARAM_3: FASTER/' $test_deployment_spec

-# Save config.env before update (to verify it gets backed up)
+# Create/modify config.env to test it isn't overwritten during sync
 config_env_file="$test_deployment_dir/config.env"
+config_env_persistent_content="PERSISTENT_VALUE=should-not-be-overwritten-$(date +%s)"
+echo "$config_env_persistent_content" >> "$config_env_file"
 original_config_env_content=$(<$config_env_file)

 # Run sync to update deployment files without destroying data
 $TEST_TARGET_SO --stack test deploy create --spec-file $test_deployment_spec --deployment-dir $test_deployment_dir --update

-# Verify config.env was regenerated from spec (reflects the FASTER change)
+# Verify config.env was not overwritten
 synced_config_env_content=$(<$config_env_file)
-if [[ "$synced_config_env_content" == *"CERC_TEST_PARAM_3=FASTER"* ]]; then
-    echo "deployment update test: config.env regenerated from spec - passed"
+if [ "$synced_config_env_content" == "$original_config_env_content" ]; then
+    echo "deployment update test: config.env preserved - passed"
 else
-    echo "deployment update test: config.env not regenerated - FAILED"
-    echo "Expected CERC_TEST_PARAM_3=FASTER in config.env"
+    echo "deployment update test: config.env was overwritten - FAILED"
+    echo "Expected: $original_config_env_content"
    echo "Got: $synced_config_env_content"
    exit 1
 fi

-# Verify old config.env was backed up
-config_env_backup="${config_env_file}.bak"
-if [ -f "$config_env_backup" ]; then
-    echo "deployment update test: config.env backed up - passed"
-else
-    echo "deployment update test: config.env backup not created - FAILED"
-    exit 1
-fi
-
 # Verify the spec file was updated in deployment dir
 updated_deployed_spec=$(<$test_deployment_dir/spec.yml)
 if [[ "$updated_deployed_spec" == *"FASTER"* ]]; then
@@ -105,15 +105,6 @@ fi
 # Add a config file to be picked up by the ConfigMap before starting.
 echo "dbfc7a4d-44a7-416d-b5f3-29842cc47650" > $test_deployment_dir/configmaps/test-config/test_config

-# Add secrets to the deployment spec (references a pre-existing k8s Secret by name).
-# deploy init already writes an empty 'secrets: {}' key, so we replace it
-# rather than appending (ruamel.yaml rejects duplicate keys).
-deployment_spec_file=${test_deployment_dir}/spec.yml
-sed -i 's/^secrets: {}$/secrets:\n  test-secret:\n    - TEST_SECRET_KEY/' ${deployment_spec_file}
-
-# Get the deployment ID for kubectl queries
-deployment_id=$(cat ${test_deployment_dir}/deployment.yml | cut -d ' ' -f 2)
-
 echo "deploy create output file test: passed"
 # Try to start the deployment
 $TEST_TARGET_SO deployment --dir $test_deployment_dir start
@@ -175,71 +166,12 @@ else
    delete_cluster_exit
 fi

-# --- New feature tests: namespace, labels, jobs, secrets ---
-
-# Check that the pod is in the deployment-specific namespace (not default)
-ns_pod_count=$(kubectl get pods -n laconic-${deployment_id} -l app=${deployment_id} --no-headers 2>/dev/null | wc -l)
-if [ "$ns_pod_count" -gt 0 ]; then
-    echo "namespace isolation test: passed"
-else
-    echo "namespace isolation test: FAILED"
-    echo "Expected pod in namespace laconic-${deployment_id}"
-    delete_cluster_exit
-fi
-
-# Check that the stack label is set on the pod
-stack_label_count=$(kubectl get pods -n laconic-${deployment_id} -l app.kubernetes.io/stack=test --no-headers 2>/dev/null | wc -l)
-if [ "$stack_label_count" -gt 0 ]; then
-    echo "stack label test: passed"
-else
-    echo "stack label test: FAILED"
-    delete_cluster_exit
-fi
-
-# Check that the job completed successfully
-for i in {1..30}; do
-    job_status=$(kubectl get job ${deployment_id}-job-test-job -n laconic-${deployment_id} -o jsonpath='{.status.succeeded}' 2>/dev/null || true)
-    if [ "$job_status" == "1" ]; then
-        break
-    fi
-    sleep 2
-done
-if [ "$job_status" == "1" ]; then
-    echo "job completion test: passed"
-else
-    echo "job completion test: FAILED"
-    echo "Job status.succeeded: ${job_status}"
-    delete_cluster_exit
-fi
-
-# Check that the secrets spec results in an envFrom secretRef on the pod
-secret_ref=$(kubectl get pod -n laconic-${deployment_id} -l app=${deployment_id} \
-    -o jsonpath='{.items[0].spec.containers[0].envFrom[?(@.secretRef.name=="test-secret")].secretRef.name}' 2>/dev/null || true)
-if [ "$secret_ref" == "test-secret" ]; then
-    echo "secrets envFrom test: passed"
-else
-    echo "secrets envFrom test: FAILED"
-    echo "Expected secretRef 'test-secret', got: ${secret_ref}"
-    delete_cluster_exit
-fi
-
-# Stop then start again and check the volume was preserved.
-# Use --skip-cluster-management to reuse the existing kind cluster instead of
-# destroying and recreating it (which fails on CI runners due to stale etcd/certs
-# and cgroup detection issues).
-# Use --delete-volumes to clear PVs so fresh PVCs can bind on restart.
-# Bind-mount data survives on the host filesystem; provisioner volumes are recreated fresh.
-$TEST_TARGET_SO deployment --dir $test_deployment_dir stop --delete-volumes --skip-cluster-management
-# Wait for the namespace to be fully terminated before restarting.
-# Without this, 'start' fails with 403 Forbidden because the namespace
-# is still in Terminating state.
-for i in {1..60}; do
-    if ! kubectl get namespace laconic-${deployment_id} 2>/dev/null | grep -q .; then
-        break
-    fi
-    sleep 2
-done
-$TEST_TARGET_SO deployment --dir $test_deployment_dir start --skip-cluster-management
+# Stop then start again and check the volume was preserved
+$TEST_TARGET_SO deployment --dir $test_deployment_dir stop
+# Sleep a bit just in case
+# sleep for longer to check if that's why the subsequent create cluster fails
+sleep 20
+$TEST_TARGET_SO deployment --dir $test_deployment_dir start
 wait_for_pods_started
 wait_for_log_output
 sleep 1
@@ -252,9 +184,8 @@ else
    delete_cluster_exit
 fi

-# Provisioner volumes are destroyed when PVs are deleted (--delete-volumes on stop).
-# Unlike bind-mount volumes whose data persists on the host, provisioner storage
-# is gone, so the volume appears fresh after restart.
+# These volumes will be completely destroyed by the kind delete/create, because they lived inside
+# the kind container.  So, unlike the bind-mount case, they will appear fresh after the restart.
 log_output_11=$( $TEST_TARGET_SO deployment --dir $test_deployment_dir logs )
 if [[ "$log_output_11" == *"/data2 filesystem is fresh"* ]]; then
    echo "Fresh provisioner volumes test: passed"
@@ -206,7 +206,7 @@ fi
 # The deployment's pod should be scheduled onto node: worker3
 # Check that's what happened
 # Get get the node onto which the stack pod has been deployed
-deployment_node=$(kubectl get pods -n laconic-${deployment_id} -l app=${deployment_id} -o=jsonpath='{.items..spec.nodeName}')
+deployment_node=$(kubectl get pods -l app=${deployment_id} -o=jsonpath='{.items..spec.nodeName}')
 expected_node=${deployment_id}-worker3
 echo "Stack pod deployed to node: ${deployment_node}"
 if [[ ${deployment_node} == ${expected_node} ]]; then
@@ -1,5 +1,5 @@
 #!/usr/bin/env bash
 # TODO: handle ARM
-curl --silent -Lo ./kind https://kind.sigs.k8s.io/dl/v0.25.0/kind-linux-amd64
+curl --silent -Lo ./kind https://kind.sigs.k8s.io/dl/v0.20.0/kind-linux-amd64
 chmod +x ./kind
 mv ./kind /usr/local/bin
@@ -1,6 +1,5 @@
 #!/usr/bin/env bash
 # TODO: handle ARM
-# Pin kubectl to match Kind's default k8s version (v1.31.x)
-curl --silent -LO "https://dl.k8s.io/release/v1.31.2/bin/linux/amd64/kubectl"
+curl --silent -LO "https://dl.k8s.io/release/$(curl -L -s https://dl.k8s.io/release/stable.txt)/bin/linux/amd64/kubectl"
 chmod +x ./kubectl
 mv ./kubectl /usr/local/bin
@@ -107,7 +107,7 @@ wheels = [

 [[package]]
 name = "black"
-version = "26.3.1"
+version = "26.3.0"
 source = { registry = "https://pypi.org/simple" }
 resolution-markers = [
    "python_full_version >= '3.10'",
@@ -122,34 +122,34 @@ dependencies = [
    { name = "tomli", marker = "python_full_version == '3.10.*'" },
    { name = "typing-extensions", version = "4.15.0", source = { registry = "https://pypi.org/simple" }, marker = "python_full_version == '3.10.*'" },
 ]
-sdist = { url = "https://files.pythonhosted.org/packages/e1/c5/61175d618685d42b005847464b8fb4743a67b1b8fdb75e50e5a96c31a27a/black-26.3.1.tar.gz", hash = "sha256:2c50f5063a9641c7eed7795014ba37b0f5fa227f3d408b968936e24bc0566b07", size = 666155, upload-time = "2026-03-12T03:36:03.593Z" }
+sdist = { url = "https://files.pythonhosted.org/packages/11/5f/25b7b149b8b7d3b958efa4faa56446560408c0f2651108a517526de0320a/black-26.3.0.tar.gz", hash = "sha256:4d438dfdba1c807c6c7c63c4f15794dda0820d2222e7c4105042ac9ddfc5dd0b", size = 664127, upload-time = "2026-03-06T17:42:33.7Z" }
 wheels = [
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