Commit Graph

41 Commits

Author SHA1 Message Date
Paul Hauner
be4e261e74 Use async code when interacting with EL (#3244)
## Overview

This rather extensive PR achieves two primary goals:

1. Uses the finalized/justified checkpoints of fork choice (FC), rather than that of the head state.
2. Refactors fork choice, block production and block processing to `async` functions.

Additionally, it achieves:

- Concurrent forkchoice updates to the EL and cache pruning after a new head is selected.
- Concurrent "block packing" (attestations, etc) and execution payload retrieval during block production.
- Concurrent per-block-processing and execution payload verification during block processing.
- The `Arc`-ification of `SignedBeaconBlock` during block processing (it's never mutated, so why not?):
    - I had to do this to deal with sending blocks into spawned tasks.
    - Previously we were cloning the beacon block at least 2 times during each block processing, these clones are either removed or turned into cheaper `Arc` clones.
    - We were also `Box`-ing and un-`Box`-ing beacon blocks as they moved throughout the networking crate. This is not a big deal, but it's nice to avoid shifting things between the stack and heap.
    - Avoids cloning *all the blocks* in *every chain segment* during sync.
    - It also has the potential to clean up our code where we need to pass an *owned* block around so we can send it back in the case of an error (I didn't do much of this, my PR is already big enough 😅)
- The `BeaconChain::HeadSafetyStatus` struct was removed. It was an old relic from prior merge specs.

For motivation for this change, see https://github.com/sigp/lighthouse/pull/3244#issuecomment-1160963273

## Changes to `canonical_head` and `fork_choice`

Previously, the `BeaconChain` had two separate fields:

```
canonical_head: RwLock<Snapshot>,
fork_choice: RwLock<BeaconForkChoice>
```

Now, we have grouped these values under a single struct:

```
canonical_head: CanonicalHead {
  cached_head: RwLock<Arc<Snapshot>>,
  fork_choice: RwLock<BeaconForkChoice>
} 
```

Apart from ergonomics, the only *actual* change here is wrapping the canonical head snapshot in an `Arc`. This means that we no longer need to hold the `cached_head` (`canonical_head`, in old terms) lock when we want to pull some values from it. This was done to avoid deadlock risks by preventing functions from acquiring (and holding) the `cached_head` and `fork_choice` locks simultaneously.

## Breaking Changes

### The `state` (root) field in the `finalized_checkpoint` SSE event

Consider the scenario where epoch `n` is just finalized, but `start_slot(n)` is skipped. There are two state roots we might in the `finalized_checkpoint` SSE event:

1. The state root of the finalized block, which is `get_block(finalized_checkpoint.root).state_root`.
4. The state root at slot of `start_slot(n)`, which would be the state from (1), but "skipped forward" through any skip slots.

Previously, Lighthouse would choose (2). However, we can see that when [Teku generates that event](de2b2801c8/data/beaconrestapi/src/main/java/tech/pegasys/teku/beaconrestapi/handlers/v1/events/EventSubscriptionManager.java (L171-L182)) it uses [`getStateRootFromBlockRoot`](de2b2801c8/data/provider/src/main/java/tech/pegasys/teku/api/ChainDataProvider.java (L336-L341)) which uses (1).

I have switched Lighthouse from (2) to (1). I think it's a somewhat arbitrary choice between the two, where (1) is easier to compute and is consistent with Teku.

## Notes for Reviewers

I've renamed `BeaconChain::fork_choice` to `BeaconChain::recompute_head`. Doing this helped ensure I broke all previous uses of fork choice and I also find it more descriptive. It describes an action and can't be confused with trying to get a reference to the `ForkChoice` struct.

I've changed the ordering of SSE events when a block is received. It used to be `[block, finalized, head]` and now it's `[block, head, finalized]`. It was easier this way and I don't think we were making any promises about SSE event ordering so it's not "breaking".

I've made it so fork choice will run when it's first constructed. I did this because I wanted to have a cached version of the last call to `get_head`. Ensuring `get_head` has been run *at least once* means that the cached values doesn't need to wrapped in an `Option`. This was fairly simple, it just involved passing a `slot` to the constructor so it knows *when* it's being run. When loading a fork choice from the store and a slot clock isn't handy I've just used the `slot` that was saved in the `fork_choice_store`. That seems like it would be a faithful representation of the slot when we saved it.

I added the `genesis_time: u64` to the `BeaconChain`. It's small, constant and nice to have around.

Since we're using FC for the fin/just checkpoints, we no longer get the `0x00..00` roots at genesis. You can see I had to remove a work-around in `ef-tests` here: b56be3bc2. I can't find any reason why this would be an issue, if anything I think it'll be better since the genesis-alias has caught us out a few times (0x00..00 isn't actually a real root). Edit: I did find a case where the `network` expected the 0x00..00 alias and patched it here: 3f26ac3e2.

You'll notice a lot of changes in tests. Generally, tests should be functionally equivalent. Here are the things creating the most diff-noise in tests:
- Changing tests to be `tokio::async` tests.
- Adding `.await` to fork choice, block processing and block production functions.
- Refactor of the `canonical_head` "API" provided by the `BeaconChain`. E.g., `chain.canonical_head.cached_head()` instead of `chain.canonical_head.read()`.
- Wrapping `SignedBeaconBlock` in an `Arc`.
- In the `beacon_chain/tests/block_verification`, we can't use the `lazy_static` `CHAIN_SEGMENT` variable anymore since it's generated with an async function. We just generate it in each test, not so efficient but hopefully insignificant.

I had to disable `rayon` concurrent tests in the `fork_choice` tests. This is because the use of `rayon` and `block_on` was causing a panic.

Co-authored-by: Mac L <mjladson@pm.me>
2022-07-03 05:36:50 +00:00
Michael Sproul
bcdd960ab1 Separate execution payloads in the DB (#3157)
## Proposed Changes

Reduce post-merge disk usage by not storing finalized execution payloads in Lighthouse's database.

⚠️ **This is achieved in a backwards-incompatible way for networks that have already merged** ⚠️. Kiln users and shadow fork enjoyers will be unable to downgrade after running the code from this PR. The upgrade migration may take several minutes to run, and can't be aborted after it begins.

The main changes are:

- New column in the database called `ExecPayload`, keyed by beacon block root.
- The `BeaconBlock` column now stores blinded blocks only.
- Lots of places that previously used full blocks now use blinded blocks, e.g. analytics APIs, block replay in the DB, etc.
- On finalization:
    - `prune_abanonded_forks` deletes non-canonical payloads whilst deleting non-canonical blocks.
    - `migrate_db` deletes finalized canonical payloads whilst deleting finalized states.
- Conversions between blinded and full blocks are implemented in a compositional way, duplicating some work from Sean's PR #3134.
- The execution layer has a new `get_payload_by_block_hash` method that reconstructs a payload using the EE's `eth_getBlockByHash` call.
   - I've tested manually that it works on Kiln, using Geth and Nethermind.
   - This isn't necessarily the most efficient method, and new engine APIs are being discussed to improve this: https://github.com/ethereum/execution-apis/pull/146.
   - We're depending on the `ethers` master branch, due to lots of recent changes. We're also using a workaround for https://github.com/gakonst/ethers-rs/issues/1134.
- Payload reconstruction is used in the HTTP API via `BeaconChain::get_block`, which is now `async`. Due to the `async` fn, the `blocking_json` wrapper has been removed.
- Payload reconstruction is used in network RPC to serve blocks-by-{root,range} responses. Here the `async` adjustment is messier, although I think I've managed to come up with a reasonable compromise: the handlers take the `SendOnDrop` by value so that they can drop it on _task completion_ (after the `fn` returns). Still, this is introducing disk reads onto core executor threads, which may have a negative performance impact (thoughts appreciated).

## Additional Info

- [x] For performance it would be great to remove the cloning of full blocks when converting them to blinded blocks to write to disk. I'm going to experiment with a `put_block` API that takes the block by value, breaks it into a blinded block and a payload, stores the blinded block, and then re-assembles the full block for the caller.
- [x] We should measure the latency of blocks-by-root and blocks-by-range responses.
- [x] We should add integration tests that stress the payload reconstruction (basic tests done, issue for more extensive tests: https://github.com/sigp/lighthouse/issues/3159)
- [x] We should (manually) test the schema v9 migration from several prior versions, particularly as blocks have changed on disk and some migrations rely on being able to load blocks.

Co-authored-by: Paul Hauner <paul@paulhauner.com>
2022-05-12 00:42:17 +00:00
Michael Sproul
41e7a07c51 Add lighthouse db command (#3129)
## Proposed Changes

Add a `lighthouse db` command with three initial subcommands:

- `lighthouse db version`: print the database schema version.
- `lighthouse db migrate --to N`: manually upgrade (or downgrade!) the database to a different version.
- `lighthouse db inspect --column C`: log the key and size in bytes of every value in a given `DBColumn`.

This PR lays the groundwork for other changes, namely:

- Mark's fast-deposit sync (https://github.com/sigp/lighthouse/pull/2915), for which I think we should implement a database downgrade (from v9 to v8).
- My `tree-states` work, which already implements a downgrade (v10 to v8).
- Standalone purge commands like `lighthouse db purge-dht` per https://github.com/sigp/lighthouse/issues/2824.

## Additional Info

I updated the `strum` crate to 0.24.0, which necessitated some changes in the network code to remove calls to deprecated methods.

Thanks to @winksaville for the motivation, and implementation work that I used as a source of inspiration (https://github.com/sigp/lighthouse/pull/2685).
2022-04-01 00:58:59 +00:00
Michael Sproul
a290a3c537 Add configurable block replayer (#2863)
## Issue Addressed

Successor to #2431

## Proposed Changes

* Add a `BlockReplayer` struct to abstract over the intricacies of calling `per_slot_processing` and `per_block_processing` while avoiding unnecessary tree hashing.
* Add a variant of the forwards state root iterator that does not require an `end_state`.
* Use the `BlockReplayer` when reconstructing states in the database. Use the efficient forwards iterator for frozen states.
* Refactor the iterators to remove `Arc<HotColdDB>` (this seems to be neater than making _everything_ an `Arc<HotColdDB>` as I did in #2431).

Supplying the state roots allow us to avoid building a tree hash cache at all when reconstructing historic states, which saves around 1 second flat (regardless of `slots-per-restore-point`). This is a small percentage of worst-case state load times with 200K validators and SPRP=2048 (~15s vs ~16s) but a significant speed-up for more frequent restore points: state loads with SPRP=32 should be now consistently <500ms instead of 1.5s (a ~3x speedup).

## Additional Info

Required by https://github.com/sigp/lighthouse/pull/2628
2021-12-21 06:30:52 +00:00
Michael Sproul
ed1fc7cca6 Fix I/O atomicity issues with checkpoint sync (#2671)
## Issue Addressed

This PR addresses an issue found by @YorickDowne during testing of v2.0.0-rc.0.

Due to a lack of atomic database writes on checkpoint sync start-up, it was possible for the database to get into an inconsistent state from which it couldn't recover without `--purge-db`. The core of the issue was that the store's anchor info was being stored _before_ the `PersistedBeaconChain`. If a crash occured so that anchor info was stored but _not_ the `PersistedBeaconChain`, then on restart Lighthouse would think the database was unitialized and attempt to compare-and-swap a `None` value, but would actually find the stale info from the previous run.

## Proposed Changes

The issue is fixed by writing the anchor info, the split point, and the `PersistedBeaconChain` atomically on start-up. Some type-hinting ugliness was required, which could possibly be cleaned up in future refactors.
2021-10-05 03:53:17 +00:00
Michael Sproul
9667dc2f03 Implement checkpoint sync (#2244)
## Issue Addressed

Closes #1891
Closes #1784

## Proposed Changes

Implement checkpoint sync for Lighthouse, enabling it to start from a weak subjectivity checkpoint.

## Additional Info

- [x] Return unavailable status for out-of-range blocks requested by peers (#2561)
- [x] Implement sync daemon for fetching historical blocks (#2561)
- [x] Verify chain hashes (either in `historical_blocks.rs` or the calling module)
- [x] Consistency check for initial block + state
- [x] Fetch the initial state and block from a beacon node HTTP endpoint
- [x] Don't crash fetching beacon states by slot from the API
- [x] Background service for state reconstruction, triggered by CLI flag or API call.

Considered out of scope for this PR:

- Drop the requirement to provide the `--checkpoint-block` (this would require some pretty heavy refactoring of block verification)


Co-authored-by: Diva M <divma@protonmail.com>
2021-09-22 00:37:28 +00:00
realbigsean
303deb9969 Rust 1.54.0 lints (#2483)
## Issue Addressed

N/A

## Proposed Changes

- Removing a bunch of unnecessary references
- Updated `Error::VariantError` to `Error::Variant`
- There were additional enum variant lints that I ignored, because I thought our variant names were fine
- removed `MonitoredValidator`'s `pubkey` field, because I couldn't find it used anywhere. It looks like we just use the string version of the pubkey (the `id` field) if there is no index

## Additional Info



Co-authored-by: realbigsean <seananderson33@gmail.com>
2021-07-30 01:11:47 +00:00
realbigsean
b84ff9f793 rust 1.53.0 updates (#2411)
## Issue Addressed

`make lint` failing on rust 1.53.0.

## Proposed Changes

1.53.0 updates

## Additional Info

I haven't figure out why yet, we were now hitting the recursion limit in a few crates. So I had to add `#![recursion_limit = "256"]` in a few places


Co-authored-by: realbigsean <seananderson33@gmail.com>
Co-authored-by: Michael Sproul <michael@sigmaprime.io>
2021-06-18 05:58:01 +00:00
Pawan Dhananjay
fdaeec631b Monitoring service api (#2251)
## Issue Addressed

N/A

## Proposed Changes

Adds a client side api for collecting system and process metrics and pushing it to a monitoring service.
2021-05-26 05:58:41 +00:00
Michael Sproul
363f15f362 Use the database to persist the pubkey cache (#2234)
## Issue Addressed

Closes #1787

## Proposed Changes

* Abstract the `ValidatorPubkeyCache` over a "backing" which is either a file (legacy), or the database.
* Implement a migration from schema v2 to schema v3, whereby the contents of the cache file are copied to the DB, and then the file is deleted. The next release to include this change must be a minor version bump, and we will need to warn users of the inability to downgrade (this is our first DB schema change since mainnet genesis).
* Move the schema migration code from the `store` crate into the `beacon_chain` crate so that it can access the datadir and the `ValidatorPubkeyCache`, etc. It gets injected back into the `store` via a closure (similar to what we do in fork choice).
2021-03-04 01:25:12 +00:00
Michael Sproul
556190ff46 Compact database on finalization (#1871)
## Issue Addressed

Closes #1866

## Proposed Changes

* Compact the database on finalization. This removes the deleted states from disk completely. Because it happens in the background migrator, it doesn't block other database operations while it runs. On my Medalla node it took about 1 minute and shrank the database from 90GB to 9GB.
* Fix an inefficiency in the pruning algorithm where it would always use the genesis checkpoint as the `old_finalized_checkpoint` when running for the first time after start-up. This would result in loading lots of states one-at-a-time back to genesis, and storing a lot of block roots in memory. The new code stores the old finalized checkpoint on disk and only uses genesis if no checkpoint is already stored. This makes it both backwards compatible _and_ forwards compatible -- no schema change required!
* Introduce two new `INFO` logs to indicate when pruning has started and completed. Users seem to want to know this information without enabling debug logs!
2020-11-09 07:02:21 +00:00
Michael Sproul
acd49d988d Implement database temp states to reduce memory usage (#1798)
## Issue Addressed

Closes #800
Closes #1713

## Proposed Changes

Implement the temporary state storage algorithm described in #800. Specifically:

* Add `DBColumn::BeaconStateTemporary`, for storing 0-length temporary marker values.
* Store intermediate states immediately as they are created, marked temporary. Delete the temporary flag if the block is processed successfully.
* Add a garbage collection process to delete leftover temporary states on start-up.
* Bump the database schema version to 2 so that a DB with temporary states can't accidentally be used with older versions of the software. The auto-migration is a no-op, but puts in place some infra that we can use for future migrations (e.g. #1784)

## Additional Info

There are two known race conditions, one potentially causing permanent faults (hopefully rare), and the other insignificant.

### Race 1: Permanent state marked temporary

EDIT: this has been fixed by the addition of a lock around the relevant critical section

There are 2 threads that are trying to store 2 different blocks that share some intermediate states (e.g. they both skip some slots from the current head). Consider this sequence of events:

1. Thread 1 checks if state `s` already exists, and seeing that it doesn't, prepares an atomic commit of `(s, s_temporary_flag)`.
2. Thread 2 does the same, but also gets as far as committing the state txn, finishing the processing of its block, and _deleting_ the temporary flag.
3. Thread 1 is (finally) scheduled again, and marks `s` as temporary with its transaction.
4.
    a) The process is killed, or thread 1's block fails verification and the temp flag is not deleted. This is a permanent failure! Any attempt to load state `s` will fail... hope it isn't on the main chain! Alternatively (4b) happens...
    b) Thread 1 finishes, and re-deletes the temporary flag. In this case the failure is transient, state `s` will disappear temporarily, but will come back once thread 1 finishes running.

I _hope_ that steps 1-3 only happen very rarely, and 4a even more rarely. It's hard to know

This once again begs the question of why we're using LevelDB (#483), when it clearly doesn't care about atomicity! A ham-fisted fix would be to wrap the hot and cold DBs in locks, which would bring us closer to how other DBs handle read-write transactions. E.g. [LMDB only allows one R/W transaction at a time](https://docs.rs/lmdb/0.8.0/lmdb/struct.Environment.html#method.begin_rw_txn).

### Race 2: Temporary state returned from `get_state`

I don't think this race really matters, but in `load_hot_state`, if another thread stores a state between when we call `load_state_temporary_flag` and when we call `load_hot_state_summary`, then we could end up returning that state even though it's only a temporary state. I can't think of any case where this would be relevant, and I suspect if it did come up, it would be safe/recoverable (having data is safer than _not_ having data).

This could be fixed by using a LevelDB read snapshot, but that would require substantial changes to how we read all our values, so I don't think it's worth it right now.
2020-10-23 01:27:51 +00:00
Michael Sproul
22aedda1be
Add database schema versioning (#1688)
## Issue Addressed

Closes #673

## Proposed Changes

Store a schema version in the database so that future releases can check they're running against a compatible database version. This would also enable automatic migration on breaking database changes, but that's left as future work.

The database config is also stored in the database so that the `slots_per_restore_point` value can be checked for consistency, which closes #673
2020-10-01 11:12:36 +10:00
Adam Szkoda
d9f4819fe0 Alternative (to BeaconChainHarness) BeaconChain testing API (#1380)
The PR:

* Adds the ability to generate a crucial test scenario that isn't possible with `BeaconChainHarness` (i.e. two blocks occupying the same slot; previously forks necessitated skipping slots):

![image](https://user-images.githubusercontent.com/165678/88195404-4bce3580-cc40-11ea-8c08-b48d2e1d5959.png)

* New testing API: Instead of repeatedly calling add_block(), you generate a sorted `Vec<Slot>` and leave it up to the framework to generate blocks at those slots.
* Jumping backwards to an earlier epoch is a hard error, so that tests necessarily generate blocks in a epoch-by-epoch manner.
* Configures the test logger so that output is printed on the console in case a test fails.  The logger also plays well with `--nocapture`, contrary to the existing testing framework
* Rewrites existing fork pruning tests to use the new API
* Adds a tests that triggers finalization at a non epoch boundary slot
* Renamed `BeaconChainYoke` to `BeaconChainTestingRig` because the former has been too confusing
* Fixed multiple tests (e.g. `block_production_different_shuffling_long`, `delete_blocks_and_states`, `shuffling_compatible_simple_fork`) that relied on a weird (and accidental) feature of the old `BeaconChainHarness` that attestations aren't produced for epochs earlier than the current one, thus masking potential bugs in test cases.

Co-authored-by: Michael Sproul <michael@sigmaprime.io>
2020-08-26 09:24:55 +00:00
Adam Szkoda
c7f47af9fb
Harden the freezing procedure against failures (#1323)
* Enable logging in tests

* Migrate states to the freezer atomically
2020-07-03 09:47:31 +10:00
Adam Szkoda
536728b975
Write new blocks and states to the database atomically (#1285)
* Mostly atomic put_state()
* Reduce number of vec allocations
* Make crucial db operations atomic
* Save restore points
* Remove StateBatch
* Merge two HotColdDB impls
* Further reduce allocations
* Review feedback
* Silence clippy warning
2020-07-01 12:45:57 +10:00
Adam Szkoda
9db0c28051
Make key value storage abstractions more accurate (#1267)
* Layer do_atomically() abstractions properly

* Reduce allocs and DRY get_key_for_col()

* Parameterize HotColdDB with hot and cold item stores

* -impl Store for MemoryStore

* Replace Store uses with HotColdDB

* Ditch Store trait

* cargo fmt

* Style fix

* Readd missing dep that broke the build
2020-06-16 11:34:04 +10:00
Adam Szkoda
7f036a6e95
Add error handling to iterators (#1243)
* Add error handling to iterators

* Review feedback

* Leverage itertools::process_results() in few places
2020-06-10 09:55:44 +10:00
Adam Szkoda
91cb14ac41
Clean up database abstractions (#1200)
* Remove redundant method

* Pull out a method out of a struct

* More precise db access abstractions

* Move fake trait method out of it

* cargo fmt

* Fix compilation error after refactoring

* Move another fake method out the Store trait

* Get rid of superfluous method

* Fix refactoring bug

* Rename: SimpleStoreItem -> StoreItem

* Get rid of the confusing DiskStore type alias

* Get rid of SimpleDiskStore type alias

* Correction: A method took both self and a ref to Self
2020-06-01 08:13:49 +10:00
Adam Szkoda
919c81fe7d
Ditch StoreItem trait (#1185) 2020-05-25 10:26:54 +10:00
Adam Szkoda
d79e07902e
Relax PartialEq constraint on error enums (#1179) 2020-05-21 10:21:44 +10:00
Adam Szkoda
59ead67f76
Race condition fix + Reliability improvements around forks pruning (#1132)
* Improve error handling in block iteration

* Introduce atomic DB operations

* Fix race condition

An invariant was violated:  For every block hash in head_tracker, that
block is accessible from the store.
2020-05-16 13:23:32 +10:00
Adam Szkoda
9c3f76a33b
Prune abandoned forks (#916)
* Address compiler warning

* Prune abandoned fork choice forks

* New approach to pruning

* Wrap some block hashes in a newtype pattern

For increased type safety.

* Add Graphviz chain dump emitter for debugging

* Fix broken test case

* Make prunes_abandoned_forks use real DiskStore

* Mark finalized blocks in the GraphViz output

* Refine debug stringification of Slot and Epoch

Before this commit: print!("{:?}", Slot(123)) == "Slot(\n123\n)".
After this commit: print!("{:?", Slot(123)) == "Slot(123)".

* Simplify build_block()

* Rewrite test case using more composable test primitives

* Working rewritten test case

* Tighten fork prunning test checks

* Add another pruning test case

* Bugfix: Finalized blocks weren't always properly detected

* Pruning: Add pruning_does_not_touch_blocks_prior_to_finalization test case

* Tighten pruning tests: check if heads are tracked properly

* Add a failing test case for a buggy scenario

* Change name of function to a more accurate one

* Fix failing test case

* Test case: Were skipped slots' states pruned?

* Style fix: Simplify dereferencing

* Tighten pruning tests: check if abandoned states are deleted

* Towards atomicity of db ops

* Correct typo

* Prune also skipped slots' states

* New logic for handling skipped states

* Make skipped slots test pass

* Post conflict resolution fixes

* Formatting fixes

* Tests passing

* Block hashes in Graphviz node labels

* Removed unused changes

* Fix bug with states having < SlotsPerHistoricalRoot roots

* Consolidate State/BlockRootsIterator for pruning

* Address review feedback

* Fix a bug in pruning tests

* Detach prune_abandoned_forks() from its object

* Move migrate.rs from store to beacon_chain

* Move forks pruning onto a background thread

* Bugfix: Heads weren't pruned when prune set contained only the head

* Rename: freeze_to_state() -> process_finalization()

* Eliminate redundant function parameter

Co-authored-by: Michael Sproul <michael@sigmaprime.io>
2020-04-20 19:59:56 +10:00
Paul Hauner
2fb6b7c793
Add no-copy block processing cache (#863)
* Add state cache, remove store cache

* Only build the head committee cache

* Fix compile error

* Fix compile error from merge

* Rename state_cache -> checkpoint_cache

* Rename Checkpoint -> Snapshot

* Tidy, add comments

* Tidy up find_head function

* Change some checkpoint -> snapshot

* Add tests

* Expose max_len

* Remove dead code

* Tidy

* Fix bug
2020-04-06 10:53:33 +10:00
Paul Hauner
8c5bcfe53a
Optimise beacon chain persistence (#851)
* Unfinished progress

* Update more persistence code

* Start fixing tests

* Combine persist head and fork choice

* Persist head on reorg

* Gracefully handle op pool and eth1 cache missing

* Fix test failure

* Address Michael's comments
2020-03-06 16:09:41 +11:00
Michael Sproul
1f16d8fe4d
Add methods to delete blocks and states from disk (#843)
Closes #833
2020-03-04 16:48:35 +11:00
Michael Sproul
371e5adcf8
Update to Spec v0.10 (#817)
* Start updating types

* WIP

* Signature hacking

* Existing EF tests passing with fake_crypto

* Updates

* Delete outdated API spec

* The refactor continues

* It compiles

* WIP test fixes

* All release tests passing bar genesis state parsing

* Update and test YamlConfig

* Update to spec v0.10 compatible BLS

* Updates to BLS EF tests

* Add EF test for AggregateVerify

And delete unused hash2curve tests for uncompressed points

* Update EF tests to v0.10.1

* Use optional block root correctly in block proc

* Use genesis fork in deposit domain. All tests pass

* Cargo fmt

* Fast aggregate verify test

* Update REST API docs

* Cargo fmt

* Fix unused import

* Bump spec tags to v0.10.1

* Add `seconds_per_eth1_block` to chainspec

* Update to timestamp based eth1 voting scheme

* Return None from `get_votes_to_consider` if block cache is empty

* Handle overflows in `is_candidate_block`

* Revert to failing tests

* Fix eth1 data sets test

* Choose default vote according to spec

* Fix collect_valid_votes tests

* Fix `get_votes_to_consider` to choose all eligible blocks

* Uncomment winning_vote tests

* Add comments; remove unused code

* Reduce seconds_per_eth1_block for simulation

* Addressed review comments

* Add test for default vote case

* Fix logs

* Remove unused functions

* Meter default eth1 votes

* Fix comments

* Address review comments; remove unused dependency

* Disable/delete two outdated tests

* Bump eth1 default vote warn to error

* Delete outdated eth1 test

Co-authored-by: Pawan Dhananjay <pawandhananjay@gmail.com>
2020-02-11 10:19:36 +11:00
Michael Sproul
e0b9fa599f
Add LRU cache to database (#837)
* Add LRU caches to store

* Improvements to LRU caches

* Take state by value in `Store::put_state`

* Store blocks by value, configurable cache sizes

* Use a StateBatch to efficiently store skip states

* Fix store tests

* Add CloneConfig test, remove unused metrics

* Use Mutexes instead of RwLocks for LRU caches
2020-02-10 11:30:21 +11:00
Paul Hauner
b771bbb60c
Add proto_array fork choice (#804)
* Start implementing proto_array

* Add progress

* Add unfinished progress

* Add further progress

* Add progress

* Add tree filtering

* Add half-finished modifications

* Add refactored version

* Tidy, add incomplete LmdGhost impl

* Move impls in LmdGhost trait def

* Remove old reduced_tree fork choice

* Combine two functions in to `compute_deltas`

* Start testing

* Add more compute_deltas tests

* Add fork choice testing

* Add more fork choice testing

* Add more fork choice tests

* Add more testing to proto-array

* Remove old tests

* Modify tests

* Add more tests

* Add more testing

* Add comments and fixes

* Re-organise crate

* Tidy, finish pruning tests

* Add ssz encoding, other pub fns

* Rename lmd_ghost > proto_array_fork_choice

* Integrate proto_array into lighthouse

* Add first pass at fixing filter

* Clean out old comments

* Add more comments

* Attempt to fix prune error

* Adjust TODO

* Fix test compile errors

* Add extra justification change check

* Update cargo.lock

* Fix fork choice test compile errors

* Most remove ffg_update_required

* Fix bug with epoch of attestation votes

* Start adding new test format

* Make fork choice tests declarative

* Create test def concept

* Move test defs into crate

* Add binary, re-org crate

* Shuffle files

* Start adding ffg tests

* Add more fork choice tests

* Add fork choice JSON dumping

* Add more detail to best node error

* Ensure fin+just checkpoints from from same block

* Rename JustificationManager

* Move checkpoint manager into own file

* Tidy

* Add targetted logging for sneaky sync bug

* Fix justified balances bug

* Add cache metrics

* Add metrics for log levels

* Fix bug in checkpoint manager

* Fix compile error in fork choice tests

* Ignore duplicate blocks in fork choice

* Add block to fock choice before db

* Rename on_new_block fn

* Fix spec inconsistency in `CheckpointManager`

* Remove BlockRootTree

* Remove old reduced_tree code fragment

* Add API endpoint for fork choice

* Add more ffg tests

* Remove block_root_tree reminents

* Ensure effective balances are used

* Remove old debugging code, fix API fault

* Add check to ensure parent block is in fork choice

* Update readme dates

* Fix readme

* Tidy checkpoint manager

* Remove fork choice yaml files from repo

* Remove fork choice yaml from repo

* General tidy

* Address majority of Michael's comments

* Tidy bin/lib business

* Remove dangling file

* Undo changes for rpc/handler from master

* Revert "Undo changes for rpc/handler from master"

This reverts commit 876edff0e4a501aafbb47113454852826dcc24e8.

Co-authored-by: Age Manning <Age@AgeManning.com>
2020-01-29 15:05:00 +11:00
Pawan Dhananjay
23a35c3767 Persist/load DHT on shutdown/startup (#659)
* Store dht enrs on shutdown

* Load enrs on startup and add tests

* Remove enr_entries from behavior

* Move all dht persisting logic to `NetworkService`

* Move `PersistedDht` from eth2-libp2p to network crate

* Add test to confirm dht persistence

* Add logging

* Remove extra call to beacon_chain persist

* Expose only mutable `add_enr` method from behaviour

* Fix tests

* Fix merge errors
2020-01-23 18:16:11 +11:00
Michael Sproul
f36a5a15d6
Store states efficiently in the hot database (#746)
* Sparse hot DB and block root tree

* Fix store_tests

* Ensure loads of hot states on boundaries are fast

* Milder error for unaligned finalized blocks
2020-01-08 13:58:01 +11:00
Michael Sproul
bd1b61a5b1 Forwards block root iterators (#672)
* Implement forwards block root iterators

* Clean up errors and docs
2019-12-06 18:52:11 +11:00
Paul Hauner
75efed305c
Faster BeaconState enc/dec (#671)
* Add state enc/dec benches

* Add example for flamegraph

* Use `PublicKeyBytes` for `Validator`

* Ripple PublicKeyBytes change through codebase

* Add benches, optimizations to store BeaconState

* Store BeaconState in StorageContainer too

* Optimize StorageContainer with std::mem magic

* Fix rest_api tests
2019-12-06 16:44:03 +11:00
Michael Sproul
d0319320ce Improve freezer DB efficiency with periodic restore points (#649)
* Draft of checkpoint freezer DB

* Fix bugs

* Adjust root iterators for checkpoint database

* Fix freezer state lookups with no slot hint

* Fix split comment

* Use "restore point" to refer to frozen states

* Resolve some FIXMEs

* Configurable slots per restore point

* Document new freezer DB functions

* Fix up StoreConfig

* Fix new test for merge

* Document SPRP default CLI flag, clarify tests
2019-12-06 14:29:06 +11:00
Michael Sproul
bf2eeae3f2 Implement freezer database (#508)
* Implement freezer database for state vectors

* Improve BeaconState safe accessors

And fix a bug in the compact committees accessor.

* Banish dodgy type bounds back to gRPC

* Clean up

* Switch to exclusive end points in chunked vec

* Cleaning up and start of tests

* Randao fix, more tests

* Fix unsightly hack

* Resolve test FIXMEs

* Config file support

* More clean-ups, migrator beginnings

* Finish migrator, integrate into BeaconChain

* Fixups

* Fix store tests

* Fix BeaconChain tests

* Fix LMD GHOST tests

* Address review comments, delete 'static bounds

* Cargo format

* Address review comments

* Fix LMD ghost tests

* Update to spec v0.9.0

* Update to v0.9.1

* Bump spec tags for v0.9.1

* Formatting, fix CI failures

* Resolve accidental KeyPair merge conflict

* Document new BeaconState functions

* Fix incorrect cache drops in `advance_caches`

* Update fork choice for v0.9.1

* Clean up some FIXMEs

* Fix a few docs/logs

* Update for new builder paradigm, spec changes

* Freezer DB integration into BeaconNode

* Cleaning up

* This works, clean it up

* Cleanups

* Fix and improve store tests

* Refine store test

* Delete unused beacon_chain_builder.rs

* Fix CLI

* Store state at split slot in hot database

* Make fork choice lookup fast again

* Store freezer DB split slot in the database

* Handle potential div by 0 in chunked_vector

* Exclude committee caches from freezer DB

* Remove FIXME about long-running test
2019-11-27 10:54:46 +11:00
Paul Hauner
c4ced3e0d2
Fix block processing blowup, upgrade metrics (#500)
* Renamed fork_choice::process_attestation_from_block

* Processing attestation in fork choice

* Retrieving state from store and checking signature

* Looser check on beacon state validity.

* Cleaned up get_attestation_state

* Expanded fork choice api to provide latest validator message.

* Checking if the an attestation contains a latest message

* Correct process_attestation error handling.

* Copy paste error in comment fixed.

* Tidy ancestor iterators

* Getting attestation slot via helper method

* Refactored attestation creation in test utils

* Revert "Refactored attestation creation in test utils"

This reverts commit 4d277fe4239a7194758b18fb5c00dfe0b8231306.

* Integration tests for free attestation processing

* Implicit conflicts resolved.

* formatting

* Do first pass on Grants code

* Add another attestation processing test

* Tidy attestation processing

* Remove old code fragment

* Add non-compiling half finished changes

* Simplify, fix bugs, add tests for chain iters

* Remove attestation processing from op pool

* Fix bug with fork choice, tidy

* Fix overly restrictive check in fork choice.

* Ensure committee cache is build during attn proc

* Ignore unknown blocks at fork choice

* Various minor fixes

* Make fork choice write lock in to read lock

* Remove unused method

* Tidy comments

* Fix attestation prod. target roots change

* Fix compile error in store iters

* Reject any attestation prior to finalization

* Begin metrics refactor

* Move beacon_chain to new metrics structure.

* Make metrics not panic if already defined

* Use global prometheus gather at rest api

* Unify common metric fns into a crate

* Add heavy metering to block processing

* Remove hypen from prometheus metric name

* Add more beacon chain metrics

* Add beacon chain persistence metric

* Prune op pool on finalization

* Add extra prom beacon chain metrics

* Prefix BeaconChain metrics with "beacon_"

* Add more store metrics

* Add basic metrics to libp2p

* Add metrics to HTTP server

* Remove old `http_server` crate

* Update metrics names to be more like standard

* Fix broken beacon chain metrics, add slot clock metrics

* Add lighthouse_metrics gather fn

* Remove http args

* Fix wrong state given to op pool prune

* Make prom metric names more consistent

* Add more metrics, tidy existing metrics

* Fix store block read metrics

* Tidy attestation metrics

* Fix minor PR comments

* Allow travis failures on beta (see desc)

There's a non-backward compatible change in `cargo fmt`. Stable and beta
do not agree.

* Tidy `lighthouse_metrics` docs

* Fix typo
2019-08-19 21:02:34 +10:00
Michael Sproul
a236003a7b Update to frozen spec ❄️ (v0.8.1) (#444)
* types: first updates for v0.8

* state_processing: epoch processing v0.8.0

* state_processing: block processing v0.8.0

* tree_hash_derive: support generics in SignedRoot

* types v0.8: update to use ssz_types

* state_processing v0.8: use ssz_types

* ssz_types: add bitwise methods and from_elem

* types: fix v0.8 FIXMEs

* ssz_types: add bitfield shift_up

* ssz_types: iterators and DerefMut for VariableList

* types,state_processing: use VariableList

* ssz_types: fix BitVector Decode impl

Fixed a typo in the implementation of ssz::Decode for BitVector, which caused it
to be considered variable length!

* types: fix test modules for v0.8 update

* types: remove slow type-level arithmetic

* state_processing: fix tests for v0.8

* op_pool: update for v0.8

* ssz_types: Bitfield difference length-independent

Allow computing the difference of two bitfields of different lengths.

* Implement compact committee support

* epoch_processing: committee & active index roots

* state_processing: genesis state builder v0.8

* state_processing: implement v0.8.1

* Further improve tree_hash

* Strip examples, tests from cached_tree_hash

* Update TreeHash, un-impl CachedTreeHash

* Update bitfield TreeHash, un-impl CachedTreeHash

* Update FixedLenVec TreeHash, unimpl CachedTreeHash

* Update update tree_hash_derive for new TreeHash

* Fix TreeHash, un-impl CachedTreeHash for ssz_types

* Remove fixed_len_vec, ssz benches

SSZ benches relied upon fixed_len_vec -- it is easier to just delete
them and rebuild them later (when necessary)

* Remove boolean_bitfield crate

* Fix fake_crypto BLS compile errors

* Update ef_tests for new v.8 type params

* Update ef_tests submodule to v0.8.1 tag

* Make fixes to support parsing ssz ef_tests

* `compact_committee...` to `compact_committees...`

* Derive more traits for `CompactCommittee`

* Flip bitfield byte-endianness

* Fix tree_hash for bitfields

* Modify CLI output for ef_tests

* Bump ssz crate version

* Update ssz_types doc comment

* Del cached tree hash tests from ssz_static tests

* Tidy SSZ dependencies

* Rename ssz_types crate to eth2_ssz_types

* validator_client: update for v0.8

* ssz_types: update union/difference for bit order swap

* beacon_node: update for v0.8, EthSpec

* types: disable cached tree hash, update min spec

* state_processing: fix slot bug in committee update

* tests: temporarily disable fork choice harness test

See #447

* committee cache: prevent out-of-bounds access

In the case where we tried to access the committee of a shard that didn't have a committee in the
current epoch, we were accessing elements beyond the end of the shuffling vector and panicking! This
commit adds a check to make the failure safe and explicit.

* fix bug in get_indexed_attestation and simplify

There was a bug in our implementation of get_indexed_attestation whereby
incorrect "committee indices" were used to index into the custody bitfield. The
bug was only observable in the case where some bits of the custody bitfield were
set to 1. The implementation has been simplified to remove the bug, and a test
added.

* state_proc: workaround for compact committees bug

https://github.com/ethereum/eth2.0-specs/issues/1315

* v0.8: updates to make the EF tests pass

* Remove redundant max operation checks.
* Always supply both messages when checking attestation signatures -- allowing
  verification of an attestation with no signatures.
* Swap the order of the fork and domain constant in `get_domain`, to match
  the spec.

* rustfmt

* ef_tests: add new epoch processing tests

* Integrate v0.8 into master (compiles)

* Remove unused crates, fix clippy lints

* Replace v0.6.3 tags w/ v0.8.1

* Remove old comment

* Ensure lmd ghost tests only run in release

* Update readme
2019-07-30 12:44:51 +10:00
John Adler
fec7168512
Fix lots of typos. 2019-07-26 15:26:06 -04:00
Paul Hauner
4a3d54761a
Add progress on reduced tree fork choice 2019-06-24 09:34:51 +10:00
Paul Hauner
c840b76cac
Tidy store crate, add comments 2019-05-21 18:49:24 +10:00
Paul Hauner
3bcf5ba706
Rename db crate to store 2019-05-21 18:20:23 +10:00