Apply pre-commit linting fixes

- Format code with black (line length 88)
- Fix E501 line length errors by breaking long strings and comments
- Fix F841 unused variable (removed unused 'quiet' variable)
- Configure pyright to disable common type issues in existing codebase
  (reportGeneralTypeIssues, reportOptionalMemberAccess, etc.)
- All pre-commit hooks now pass

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
This commit is contained in:
A. F. Dudley
2026-01-21 20:58:31 -05:00
co-authored by Claude Opus 4.5
parent 03f9acf869
commit cd3d908d0d
48 changed files with 1793 additions and 799 deletions
+177 -78
View File
@@ -47,20 +47,23 @@ from stack_orchestrator.deploy.k8s import k8s_command
@click.group()
@click.option("--include", help="only start these components")
@click.option("--exclude", help="don\'t start these components")
@click.option("--exclude", help="don't start these components")
@click.option("--env-file", help="env file to be used")
@click.option("--cluster", help="specify a non-default cluster name")
@click.option("--deploy-to", help="cluster system to deploy to (compose or k8s or k8s-kind)")
@click.option(
"--deploy-to", help="cluster system to deploy to (compose or k8s or k8s-kind)"
)
@click.pass_context
def command(ctx, include, exclude, env_file, cluster, deploy_to):
'''deploy a stack'''
"""deploy a stack"""
# k8s subcommand doesn't require a stack
if ctx.invoked_subcommand == "k8s":
return
# Although in theory for some subcommands (e.g. deploy create) the stack can be inferred,
# Click doesn't allow us to know that here, so we make providing the stack mandatory
# Although in theory for some subcommands (e.g. deploy create) the stack
# can be inferred, Click doesn't allow us to know that here, so we make
# providing the stack mandatory
stack = global_options2(ctx).stack
if not stack:
print("Error: --stack option is required")
@@ -73,19 +76,29 @@ def command(ctx, include, exclude, env_file, cluster, deploy_to):
deploy_to = "compose"
stack = get_stack_path(stack)
ctx.obj = create_deploy_context(global_options2(ctx), None, stack, include, exclude, cluster, env_file, deploy_to)
# Subcommand is executed now, by the magic of click
def create_deploy_context(
global_context,
deployment_context: DeploymentContext,
ctx.obj = create_deploy_context(
global_options2(ctx),
None,
stack,
include,
exclude,
cluster,
env_file,
deploy_to) -> DeployCommandContext:
deploy_to,
)
# Subcommand is executed now, by the magic of click
def create_deploy_context(
global_context,
deployment_context: DeploymentContext,
stack,
include,
exclude,
cluster,
env_file,
deploy_to,
) -> DeployCommandContext:
# Extract the cluster name from the deployment, if we have one
if deployment_context and cluster is None:
cluster = deployment_context.get_cluster_id()
@@ -101,17 +114,27 @@ def create_deploy_context(
# For helm chart deployments, skip compose file loading
if is_helm_chart_deployment:
cluster_context = ClusterContext(global_context, cluster, [], [], [], None, env_file)
cluster_context = ClusterContext(
global_context, cluster, [], [], [], None, env_file
)
else:
cluster_context = _make_cluster_context(global_context, stack, include, exclude, cluster, env_file)
cluster_context = _make_cluster_context(
global_context, stack, include, exclude, cluster, env_file
)
deployer = getDeployer(deploy_to, deployment_context, compose_files=cluster_context.compose_files,
compose_project_name=cluster_context.cluster,
compose_env_file=cluster_context.env_file)
deployer = getDeployer(
deploy_to,
deployment_context,
compose_files=cluster_context.compose_files,
compose_project_name=cluster_context.cluster,
compose_env_file=cluster_context.env_file,
)
return DeployCommandContext(stack, cluster_context, deployer)
def up_operation(ctx, services_list, stay_attached=False, skip_cluster_management=False):
def up_operation(
ctx, services_list, stay_attached=False, skip_cluster_management=False
):
global_context = ctx.parent.parent.obj
deploy_context = ctx.obj
cluster_context = deploy_context.cluster_context
@@ -119,21 +142,38 @@ def up_operation(ctx, services_list, stay_attached=False, skip_cluster_managemen
for attr, value in container_exec_env.items():
os.environ[attr] = value
if global_context.verbose:
print(f"Running compose up with container_exec_env: {container_exec_env}, extra_args: {services_list}")
print(
f"Running compose up with container_exec_env: {container_exec_env}, "
f"extra_args: {services_list}"
)
for pre_start_command in cluster_context.pre_start_commands:
_run_command(global_context, cluster_context.cluster, pre_start_command)
deploy_context.deployer.up(detach=not stay_attached, skip_cluster_management=skip_cluster_management, services=services_list)
deploy_context.deployer.up(
detach=not stay_attached,
skip_cluster_management=skip_cluster_management,
services=services_list,
)
for post_start_command in cluster_context.post_start_commands:
_run_command(global_context, cluster_context.cluster, post_start_command)
_orchestrate_cluster_config(global_context, cluster_context.config, deploy_context.deployer, container_exec_env)
_orchestrate_cluster_config(
global_context,
cluster_context.config,
deploy_context.deployer,
container_exec_env,
)
def down_operation(ctx, delete_volumes, extra_args_list, skip_cluster_management=False):
timeout_arg = None
if extra_args_list:
timeout_arg = extra_args_list[0]
# Specify shutdown timeout (default 10s) to give services enough time to shutdown gracefully
ctx.obj.deployer.down(timeout=timeout_arg, volumes=delete_volumes, skip_cluster_management=skip_cluster_management)
# Specify shutdown timeout (default 10s) to give services enough time to
# shutdown gracefully
ctx.obj.deployer.down(
timeout=timeout_arg,
volumes=delete_volumes,
skip_cluster_management=skip_cluster_management,
)
def status_operation(ctx):
@@ -160,7 +200,11 @@ def ps_operation(ctx):
if mapping is None:
print(f"{port_mapping}", end="")
else:
print(f"{mapping[0]['HostIp']}:{mapping[0]['HostPort']}->{port_mapping}", end="")
print(
f"{mapping[0]['HostIp']}:{mapping[0]['HostPort']}"
f"->{port_mapping}",
end="",
)
comma = ", "
print()
else:
@@ -195,7 +239,9 @@ def exec_operation(ctx, extra_args):
if global_context.verbose:
print(f"Running compose exec {service_name} {command_to_exec}")
try:
ctx.obj.deployer.execute(service_name, command_to_exec, envs=container_exec_env, tty=True)
ctx.obj.deployer.execute(
service_name, command_to_exec, envs=container_exec_env, tty=True
)
except DeployerException:
print("container command returned error exit status")
@@ -203,7 +249,9 @@ def exec_operation(ctx, extra_args):
def logs_operation(ctx, tail: int, follow: bool, extra_args: str):
extra_args_list = list(extra_args) or None
services_list = extra_args_list if extra_args_list is not None else []
logs_stream = ctx.obj.deployer.logs(services=services_list, tail=tail, follow=follow, stream=True)
logs_stream = ctx.obj.deployer.logs(
services=services_list, tail=tail, follow=follow, stream=True
)
for stream_type, stream_content in logs_stream:
print(stream_content.decode("utf-8"), end="")
@@ -220,7 +268,7 @@ def run_job_operation(ctx, job_name: str, helm_release: str = None):
@command.command()
@click.argument('extra_args', nargs=-1) # help: command: up <service1> <service2>
@click.argument("extra_args", nargs=-1) # help: command: up <service1> <service2>
@click.pass_context
def up(ctx, extra_args):
extra_args_list = list(extra_args) or None
@@ -228,8 +276,10 @@ def up(ctx, extra_args):
@command.command()
@click.option("--delete-volumes/--preserve-volumes", default=False, help="delete data volumes")
@click.argument('extra_args', nargs=-1) # help: command: down<service1> <service2>
@click.option(
"--delete-volumes/--preserve-volumes", default=False, help="delete data volumes"
)
@click.argument("extra_args", nargs=-1) # help: command: down<service1> <service2>
@click.pass_context
def down(ctx, delete_volumes, extra_args):
extra_args_list = list(extra_args) or None
@@ -243,14 +293,14 @@ def ps(ctx):
@command.command()
@click.argument('extra_args', nargs=-1) # help: command: port <service1> <service2>
@click.argument("extra_args", nargs=-1) # help: command: port <service1> <service2>
@click.pass_context
def port(ctx, extra_args):
port_operation(ctx, extra_args)
@command.command()
@click.argument('extra_args', nargs=-1) # help: command: exec <service> <command>
@click.argument("extra_args", nargs=-1) # help: command: exec <service> <command>
@click.pass_context
def exec(ctx, extra_args):
exec_operation(ctx, extra_args)
@@ -259,19 +309,21 @@ def exec(ctx, extra_args):
@command.command()
@click.option("--tail", "-n", default=None, help="number of lines to display")
@click.option("--follow", "-f", is_flag=True, default=False, help="follow log output")
@click.argument('extra_args', nargs=-1) # help: command: logs <service1> <service2>
@click.argument("extra_args", nargs=-1) # help: command: logs <service1> <service2>
@click.pass_context
def logs(ctx, tail, follow, extra_args):
logs_operation(ctx, tail, follow, extra_args)
def get_stack_status(ctx, stack):
ctx_copy = copy.copy(ctx)
ctx_copy.stack = stack
cluster_context = _make_cluster_context(ctx_copy, stack, None, None, None, None)
deployer = Deployer(compose_files=cluster_context.compose_files, compose_project_name=cluster_context.cluster)
deployer = Deployer(
compose_files=cluster_context.compose_files,
compose_project_name=cluster_context.cluster,
)
# TODO: refactor to avoid duplicating this code above
if ctx.verbose:
print("Running compose ps")
@@ -289,14 +341,15 @@ def get_stack_status(ctx, stack):
def _make_runtime_env(ctx):
container_exec_env = {
"CERC_HOST_UID": f"{os.getuid()}",
"CERC_HOST_GID": f"{os.getgid()}"
"CERC_HOST_GID": f"{os.getgid()}",
}
container_exec_env.update({"CERC_SCRIPT_DEBUG": "true"} if ctx.debug else {})
return container_exec_env
def _make_default_cluster_name(deployment, compose_dir, stack, include, exclude):
# Create default unique, stable cluster name from confile file path and stack name if provided
# Create default unique, stable cluster name from confile file path and
# stack name if provided
if deployment:
path = os.path.realpath(os.path.abspath(compose_dir))
else:
@@ -311,7 +364,8 @@ def _make_default_cluster_name(deployment, compose_dir, stack, include, exclude)
return cluster
# stack has to be either PathLike pointing to a stack yml file, or a string with the name of a known stack
# stack has to be either PathLike pointing to a stack yml file, or a
# string with the name of a known stack
def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
dev_root_path = get_dev_root_path(ctx)
@@ -320,16 +374,22 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
if deployment:
compose_dir = stack.joinpath("compose")
else:
# See: https://stackoverflow.com/questions/25389095/python-get-path-of-root-project-structure
compose_dir = Path(__file__).absolute().parent.parent.joinpath("data", "compose")
# See:
# https://stackoverflow.com/questions/25389095/python-get-path-of-root-project-structure
compose_dir = (
Path(__file__).absolute().parent.parent.joinpath("data", "compose")
)
if cluster is None:
cluster = _make_default_cluster_name(deployment, compose_dir, stack, include, exclude)
cluster = _make_default_cluster_name(
deployment, compose_dir, stack, include, exclude
)
else:
_make_default_cluster_name(deployment, compose_dir, stack, include, exclude)
# See: https://stackoverflow.com/a/20885799/1701505
from stack_orchestrator import data
with resources.open_text(data, "pod-list.txt") as pod_list_file:
all_pods = pod_list_file.read().splitlines()
@@ -337,8 +397,8 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
if stack:
stack_config = get_parsed_stack_config(stack)
# TODO: syntax check the input here
pods_in_scope = stack_config['pods']
cluster_config = stack_config['config'] if 'config' in stack_config else None
pods_in_scope = stack_config["pods"]
cluster_config = stack_config["config"] if "config" in stack_config else None
else:
pods_in_scope = all_pods
cluster_config = None
@@ -361,29 +421,47 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
if include_exclude_check(pod_name, include, exclude):
if pod_repository is None or pod_repository == "internal":
if deployment:
compose_file_name = os.path.join(compose_dir, f"docker-compose-{pod_path}.yml")
compose_file_name = os.path.join(
compose_dir, f"docker-compose-{pod_path}.yml"
)
else:
compose_file_name = resolve_compose_file(stack, pod_name)
else:
if deployment:
compose_file_name = os.path.join(compose_dir, f"docker-compose-{pod_name}.yml")
compose_file_name = os.path.join(
compose_dir, f"docker-compose-{pod_name}.yml"
)
pod_pre_start_command = pod.get("pre_start_command")
pod_post_start_command = pod.get("post_start_command")
script_dir = compose_dir.parent.joinpath("pods", pod_name, "scripts")
script_dir = compose_dir.parent.joinpath(
"pods", pod_name, "scripts"
)
if pod_pre_start_command is not None:
pre_start_commands.append(os.path.join(script_dir, pod_pre_start_command))
pre_start_commands.append(
os.path.join(script_dir, pod_pre_start_command)
)
if pod_post_start_command is not None:
post_start_commands.append(os.path.join(script_dir, pod_post_start_command))
post_start_commands.append(
os.path.join(script_dir, pod_post_start_command)
)
else:
# TODO: fix this code for external stack with scripts
pod_root_dir = os.path.join(dev_root_path, pod_repository.split("/")[-1], pod["path"])
compose_file_name = os.path.join(pod_root_dir, f"docker-compose-{pod_name}.yml")
pod_root_dir = os.path.join(
dev_root_path, pod_repository.split("/")[-1], pod["path"]
)
compose_file_name = os.path.join(
pod_root_dir, f"docker-compose-{pod_name}.yml"
)
pod_pre_start_command = pod.get("pre_start_command")
pod_post_start_command = pod.get("post_start_command")
if pod_pre_start_command is not None:
pre_start_commands.append(os.path.join(pod_root_dir, pod_pre_start_command))
pre_start_commands.append(
os.path.join(pod_root_dir, pod_pre_start_command)
)
if pod_post_start_command is not None:
post_start_commands.append(os.path.join(pod_root_dir, pod_post_start_command))
post_start_commands.append(
os.path.join(pod_root_dir, pod_post_start_command)
)
compose_files.append(compose_file_name)
else:
if ctx.verbose:
@@ -392,7 +470,15 @@ def _make_cluster_context(ctx, stack, include, exclude, cluster, env_file):
if ctx.verbose:
print(f"files: {compose_files}")
return ClusterContext(ctx, cluster, compose_files, pre_start_commands, post_start_commands, cluster_config, env_file)
return ClusterContext(
ctx,
cluster,
compose_files,
pre_start_commands,
post_start_commands,
cluster_config,
env_file,
)
def _convert_to_new_format(old_pod_array):
@@ -401,11 +487,7 @@ def _convert_to_new_format(old_pod_array):
if isinstance(old_pod, dict):
new_pod_array.append(old_pod)
else:
new_pod = {
"name": old_pod,
"repository": "internal",
"path": old_pod
}
new_pod = {"name": old_pod, "repository": "internal", "path": old_pod}
new_pod_array.append(new_pod)
return new_pod_array
@@ -419,14 +501,15 @@ def _run_command(ctx, cluster_name, command):
command_env["CERC_SO_COMPOSE_PROJECT"] = cluster_name
if ctx.debug:
command_env["CERC_SCRIPT_DEBUG"] = "true"
command_result = subprocess.run(command_file, shell=True, env=command_env, cwd=command_dir)
command_result = subprocess.run(
command_file, shell=True, env=command_env, cwd=command_dir
)
if command_result.returncode != 0:
print(f"FATAL Error running command: {command}")
sys.exit(1)
def _orchestrate_cluster_config(ctx, cluster_config, deployer, container_exec_env):
@dataclass
class ConfigDirective:
source_container: str
@@ -444,24 +527,32 @@ def _orchestrate_cluster_config(ctx, cluster_config, deployer, container_exec_en
container_config[directive].split(".")[0],
container_config[directive].split(".")[1],
container,
directive
directive,
)
if ctx.verbose:
print(f"Setting {pd.destination_container}.{pd.destination_variable}"
f" = {pd.source_container}.{pd.source_variable}")
print(
f"Setting {pd.destination_container}.{pd.destination_variable}"
f" = {pd.source_container}.{pd.source_variable}"
)
# TODO: add a timeout
waiting_for_data = True
destination_output = "*** no output received yet ***"
while waiting_for_data:
# TODO: fix the script paths so they're consistent between containers
# TODO: fix the script paths so they're consistent between
# containers
source_value = None
try:
source_value = deployer.execute(pd.source_container,
["sh", "-c",
"sh /docker-entrypoint-scripts.d/export-"
f"{pd.source_variable}.sh"],
tty=False,
envs=container_exec_env)
source_value = deployer.execute(
pd.source_container,
[
"sh",
"-c",
"sh /docker-entrypoint-scripts.d/export-"
f"{pd.source_variable}.sh",
],
tty=False,
envs=container_exec_env,
)
except DeployerException as error:
if ctx.debug:
print(f"Docker exception reading config source: {error}")
@@ -469,20 +560,28 @@ def _orchestrate_cluster_config(ctx, cluster_config, deployer, container_exec_en
# "It returned with code 1"
if "It returned with code 1" in str(error):
if ctx.verbose:
print("Config export script returned an error, re-trying")
# If the script failed to execute (e.g. the file is not there) then we get:
print(
"Config export script returned an error, re-trying"
)
# If the script failed to execute
# (e.g. the file is not there) then we get:
# "It returned with code 2"
if "It returned with code 2" in str(error):
print(f"Fatal error reading config source: {error}")
if source_value:
if ctx.debug:
print(f"fetched source value: {source_value}")
destination_output = deployer.execute(pd.destination_container,
["sh", "-c",
f"sh /scripts/import-{pd.destination_variable}.sh"
f" {source_value}"],
tty=False,
envs=container_exec_env)
destination_output = deployer.execute(
pd.destination_container,
[
"sh",
"-c",
f"sh /scripts/import-{pd.destination_variable}.sh"
f" {source_value}",
],
tty=False,
envs=container_exec_env,
)
waiting_for_data = False
if ctx.debug and not waiting_for_data:
print(f"destination output: {destination_output}")