2020-02-05 13:42:38 +00:00
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/*
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This file is part of solidity.
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solidity is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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solidity is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with solidity. If not, see <http://www.gnu.org/licenses/>.
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*/
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2020-07-17 14:54:12 +00:00
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// SPDX-License-Identifier: GPL-3.0
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2020-02-05 13:42:38 +00:00
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2020-03-02 08:40:58 +00:00
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#include <test/yulPhaser/TestHelpers.h>
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2020-02-05 13:42:38 +00:00
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#include <tools/yulPhaser/Mutations.h>
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#include <tools/yulPhaser/SimulationRNG.h>
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2020-03-11 02:49:16 +00:00
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#include <libsolutil/CommonIO.h>
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2020-09-11 20:01:37 +00:00
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#include <libyul/optimiser/Suite.h>
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2020-03-11 02:49:16 +00:00
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2020-02-05 13:42:38 +00:00
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#include <boost/test/unit_test.hpp>
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2020-09-11 16:53:47 +00:00
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#include <boost/algorithm/string/predicate.hpp>
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2020-02-05 13:42:38 +00:00
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#include <algorithm>
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#include <vector>
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using namespace std;
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using namespace solidity::util;
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using namespace solidity::yul;
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2020-02-05 13:42:38 +00:00
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namespace solidity::phaser::test
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{
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2020-07-08 15:56:14 +00:00
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BOOST_AUTO_TEST_SUITE(Phaser, *boost::unit_test::label("nooptions"))
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2020-02-05 13:42:38 +00:00
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BOOST_AUTO_TEST_SUITE(MutationsTest)
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BOOST_AUTO_TEST_SUITE(GeneRandomisationTest)
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BOOST_AUTO_TEST_CASE(geneRandomisation_should_iterate_over_genes_and_replace_them_with_random_ones_with_given_probability)
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{
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2020-09-11 20:01:37 +00:00
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size_t constexpr inputLength = 1000;
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double constexpr tolerance = 0.05;
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// Use genes that do not represent valid step abbreviations to be able to easily spot added steps.
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assert(OptimiserSuite::stepAbbreviationToNameMap().count('.') == 0);
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Chromosome input = Chromosome(string(inputLength, '.'));
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SimulationRNG::reset(1);
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2020-09-11 20:01:37 +00:00
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for (size_t randomisationChancePercent = 20; randomisationChancePercent <= 100; randomisationChancePercent += 20)
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{
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double const randomisationChance = double(randomisationChancePercent) / 100.0;
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Chromosome output = geneRandomisation(randomisationChance)(input);
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string outputGenes = output.genes();
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BOOST_REQUIRE(output.length() == input.length());
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double const expectedValue = randomisationChance;
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double const variance = randomisationChance * (1 - randomisationChance);
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double const randomisedGeneCount = double(input.length() - static_cast<size_t>(count(outputGenes.begin(), outputGenes.end(), '.')));
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double const squaredError =
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(inputLength - randomisedGeneCount) * expectedValue * expectedValue +
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randomisedGeneCount * (1 - expectedValue) * (1 - expectedValue);
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BOOST_TEST(abs(randomisedGeneCount / inputLength - expectedValue) < tolerance);
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BOOST_TEST(abs(squaredError / inputLength - variance) < tolerance);
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}
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}
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BOOST_AUTO_TEST_CASE(geneRandomisation_should_return_identical_chromosome_if_probability_is_zero)
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{
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Chromosome chromosome("fcCUnDvejsrmV");
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function<Mutation> mutation = geneRandomisation(0.0);
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BOOST_TEST(mutation(chromosome) == chromosome);
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}
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BOOST_AUTO_TEST_CASE(geneDeletion_should_iterate_over_genes_and_delete_them_with_given_probability)
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{
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size_t constexpr inputLength = 1000;
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double constexpr tolerance = 0.05;
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// Use genes that do not represent valid step abbreviations to be able to easily spot added steps.
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assert(OptimiserSuite::stepAbbreviationToNameMap().count('.') == 0);
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Chromosome input = Chromosome(string(inputLength, '.'));
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SimulationRNG::reset(1);
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for (size_t deletionChancePercent = 20; deletionChancePercent < 100; deletionChancePercent += 20)
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{
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double const deletionChance = double(deletionChancePercent) / 100.0;
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Chromosome output = geneDeletion(deletionChance)(input);
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string outputGenes = output.genes();
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BOOST_REQUIRE(output.length() <= input.length());
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BOOST_REQUIRE(static_cast<size_t>(count(outputGenes.begin(), outputGenes.end(), '.')) == output.length());
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double const expectedValue = deletionChance;
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double const variance = deletionChance * (1.0 - deletionChance);
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double const deletedGeneCount = double(input.length() - output.length());
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double const squaredError =
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(double(inputLength) - deletedGeneCount) * expectedValue * expectedValue +
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deletedGeneCount * (1.0 - expectedValue) * (1.0 - expectedValue);
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BOOST_TEST(abs(deletedGeneCount / double(inputLength) - expectedValue) < tolerance);
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BOOST_TEST(abs(squaredError / double(inputLength) - variance) < tolerance);
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}
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}
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BOOST_AUTO_TEST_CASE(geneDeletion_should_return_identical_chromosome_if_probability_is_zero)
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{
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Chromosome chromosome("fcCUnDvejsrmV");
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function<Mutation> mutation = geneDeletion(0.0);
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BOOST_TEST(mutation(chromosome) == chromosome);
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}
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BOOST_AUTO_TEST_CASE(geneDeletion_should_delete_all_genes_if_probability_is_one)
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{
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Chromosome chromosome("fcCUnDvejsrmV");
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function<Mutation> mutation = geneDeletion(1.0);
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BOOST_TEST(mutation(chromosome) == Chromosome(""));
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}
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BOOST_AUTO_TEST_CASE(geneAddition_should_iterate_over_gene_positions_and_insert_new_genes_with_given_probability)
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{
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size_t constexpr inputLength = 1000;
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double constexpr tolerance = 0.05;
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size_t constexpr maxAdditions = inputLength + 1;
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// Use genes that do not represent valid step abbreviations to be able to easily spot added steps.
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assert(OptimiserSuite::stepAbbreviationToNameMap().count('.') == 0);
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Chromosome input = Chromosome(string(inputLength, '.'));
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SimulationRNG::reset(1);
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for (size_t additionChancePercent = 20; additionChancePercent < 100; additionChancePercent += 20)
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{
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double const additionChance = double(additionChancePercent) / 100.0;
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Chromosome output = geneAddition(additionChance)(input);
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BOOST_REQUIRE(output.length() >= input.length());
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BOOST_REQUIRE(output.length() <= inputLength + maxAdditions);
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string_view outputGenes = output.genes();
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size_t preservedGeneCount = static_cast<size_t>(count(outputGenes.begin(), outputGenes.end(), '.'));
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BOOST_REQUIRE(preservedGeneCount == input.length());
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double const expectedValue = additionChance;
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double const variance = additionChance * (1.0 - additionChance);
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double const addedGeneCount = double(output.length() - preservedGeneCount);
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double const squaredError =
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(double(maxAdditions) - addedGeneCount) * expectedValue * expectedValue +
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addedGeneCount * (1.0 - expectedValue) * (1.0 - expectedValue);
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2020-09-11 20:01:37 +00:00
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2019-12-12 23:39:29 +00:00
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BOOST_TEST(abs(addedGeneCount / double(maxAdditions) - expectedValue) < tolerance);
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BOOST_TEST(abs(squaredError / double(maxAdditions) - variance) < tolerance);
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}
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2020-02-05 13:42:38 +00:00
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}
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BOOST_AUTO_TEST_CASE(geneAddition_should_be_able_to_insert_before_first_position)
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{
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SimulationRNG::reset(7);
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Chromosome chromosome("fcCUnDvejs");
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function<Mutation> mutation = geneAddition(0.1);
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Chromosome mutatedChromosome = mutation(chromosome);
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BOOST_TEST(mutatedChromosome.length() > chromosome.length());
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2020-09-11 16:53:47 +00:00
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BOOST_TEST(boost::ends_with(mutatedChromosome.genes(), chromosome.genes()));
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}
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BOOST_AUTO_TEST_CASE(geneAddition_should_be_able_to_insert_after_last_position)
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{
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SimulationRNG::reset(81);
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Chromosome chromosome("fcCUnDvejs");
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function<Mutation> mutation = geneAddition(0.1);
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Chromosome mutatedChromosome = mutation(chromosome);
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BOOST_TEST(mutatedChromosome.length() > chromosome.length());
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BOOST_TEST(boost::starts_with(mutatedChromosome.genes(), chromosome.genes()));
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2020-02-05 13:42:38 +00:00
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}
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BOOST_AUTO_TEST_CASE(geneAddition_should_return_identical_chromosome_if_probability_is_zero)
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{
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Chromosome chromosome("fcCUnDvejsrmV");
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function<Mutation> mutation = geneAddition(0.0);
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BOOST_TEST(mutation(chromosome) == chromosome);
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}
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BOOST_AUTO_TEST_CASE(geneAddition_should_insert_genes_at_all_positions_if_probability_is_one)
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{
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Chromosome chromosome("fcCUnDvejsrmV");
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function<Mutation> mutation = geneAddition(1.0);
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Chromosome mutatedChromosome = mutation(chromosome);
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BOOST_TEST(mutatedChromosome.length() == chromosome.length() * 2 + 1);
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vector<string> originalGenes;
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for (size_t i = 0; i < mutatedChromosome.length() - 1; ++i)
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if (i % 2 == 1)
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originalGenes.push_back(mutatedChromosome.optimisationSteps()[i]);
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BOOST_TEST(Chromosome(originalGenes) == chromosome);
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}
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BOOST_AUTO_TEST_CASE(alternativeMutations_should_choose_between_mutations_with_given_probability)
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{
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SimulationRNG::reset(1);
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Chromosome chromosome("a");
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function<Mutation> mutation = alternativeMutations(
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0.8,
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wholeChromosomeReplacement(Chromosome("c")),
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wholeChromosomeReplacement(Chromosome("f"))
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);
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size_t cCount = 0;
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size_t fCount = 0;
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for (size_t i = 0; i < 10; ++i)
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{
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Chromosome mutatedChromosome = mutation(chromosome);
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cCount += (mutatedChromosome == Chromosome("c") ? 1u : 0u);
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fCount += (mutatedChromosome == Chromosome("f") ? 1u : 0u);
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2020-02-05 13:42:38 +00:00
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}
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// This particular seed results in 7 "c"s out of 10 which looks plausible given the 80% chance.
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BOOST_TEST(cCount == 7);
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BOOST_TEST(fCount == 3);
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}
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BOOST_AUTO_TEST_CASE(alternativeMutations_should_always_choose_first_mutation_if_probability_is_one)
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{
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Chromosome chromosome("a");
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function<Mutation> mutation = alternativeMutations(
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1.0,
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wholeChromosomeReplacement(Chromosome("c")),
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wholeChromosomeReplacement(Chromosome("f"))
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);
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for (size_t i = 0; i < 10; ++i)
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BOOST_TEST(mutation(chromosome) == Chromosome("c"));
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}
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BOOST_AUTO_TEST_CASE(alternativeMutations_should_always_choose_second_mutation_if_probability_is_zero)
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{
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Chromosome chromosome("a");
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function<Mutation> mutation = alternativeMutations(
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0.0,
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wholeChromosomeReplacement(Chromosome("c")),
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wholeChromosomeReplacement(Chromosome("f"))
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);
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for (size_t i = 0; i < 10; ++i)
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BOOST_TEST(mutation(chromosome) == Chromosome("f"));
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}
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2020-03-11 22:45:46 +00:00
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BOOST_AUTO_TEST_CASE(mutationSequence_should_apply_all_mutations)
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{
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Chromosome chromosome("aaaaa");
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2020-09-11 16:33:25 +00:00
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vector<string> steps = Chromosome::genesToSteps("gfc");
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2020-03-11 22:45:46 +00:00
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function<Mutation> mutation = mutationSequence({
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geneSubstitution(3, steps[0]),
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geneSubstitution(2, steps[1]),
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geneSubstitution(1, steps[2]),
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2020-03-11 22:45:46 +00:00
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});
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BOOST_TEST(mutation(chromosome) == Chromosome("acfga"));
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}
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BOOST_AUTO_TEST_CASE(mutationSequence_apply_mutations_in_the_order_they_are_given)
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{
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Chromosome chromosome("aa");
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2020-09-11 16:33:25 +00:00
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vector<string> steps = Chromosome::genesToSteps("gcfo");
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2020-03-11 22:45:46 +00:00
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function<Mutation> mutation = mutationSequence({
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geneSubstitution(0, steps[0]),
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geneSubstitution(1, steps[1]),
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geneSubstitution(0, steps[2]),
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geneSubstitution(1, steps[3]),
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2020-03-11 22:45:46 +00:00
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});
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BOOST_TEST(mutation(chromosome) == Chromosome("fo"));
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}
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BOOST_AUTO_TEST_CASE(mutationSequence_should_return_unmodified_chromosome_if_given_no_mutations)
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{
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Chromosome chromosome("aa");
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function<Mutation> mutation = mutationSequence({});
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BOOST_TEST(mutation(chromosome) == chromosome);
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}
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2020-02-06 03:34:09 +00:00
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BOOST_AUTO_TEST_CASE(randomPointCrossover_should_swap_chromosome_parts_at_random_point)
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{
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function<Crossover> crossover = randomPointCrossover();
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2020-02-13 22:44:06 +00:00
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SimulationRNG::reset(1);
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Chromosome result1 = crossover(Chromosome("aaaaaaaaaa"), Chromosome("cccccc"));
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2020-02-06 03:34:09 +00:00
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BOOST_TEST(result1 == Chromosome("aaaccc"));
|
2020-02-13 22:44:06 +00:00
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
Chromosome result2 = crossover(Chromosome("cccccc"), Chromosome("aaaaaaaaaa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result2 == Chromosome("cccaaaaaaa"));
|
|
|
|
}
|
|
|
|
|
2020-03-11 01:11:58 +00:00
|
|
|
BOOST_AUTO_TEST_CASE(symmetricRandomPointCrossover_should_swap_chromosome_parts_at_random_point)
|
|
|
|
{
|
|
|
|
function<SymmetricCrossover> crossover = symmetricRandomPointCrossover();
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
tuple<Chromosome, Chromosome> result1 = crossover(Chromosome("aaaaaaaaaa"), Chromosome("cccccc"));
|
|
|
|
tuple<Chromosome, Chromosome> expectedPair1 = {Chromosome("aaaccc"), Chromosome("cccaaaaaaa")};
|
|
|
|
BOOST_TEST(result1 == expectedPair1);
|
|
|
|
|
|
|
|
tuple<Chromosome, Chromosome> result2 = crossover(Chromosome("cccccc"), Chromosome("aaaaaaaaaa"));
|
|
|
|
tuple<Chromosome, Chromosome> expectedPair2 = {Chromosome("ccccccaaaa"), Chromosome("aaaaaa")};
|
|
|
|
BOOST_TEST(result2 == expectedPair2);
|
|
|
|
}
|
|
|
|
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_AUTO_TEST_CASE(randomPointCrossover_should_only_consider_points_available_on_both_chromosomes)
|
|
|
|
{
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
function<Crossover> crossover = randomPointCrossover();
|
|
|
|
|
|
|
|
for (size_t i = 0; i < 30; ++i)
|
|
|
|
{
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result1 = crossover(Chromosome("aaa"), Chromosome("TTTTTTTTTTTTTTTTTTTT"));
|
|
|
|
Chromosome result2 = crossover(Chromosome("TTTTTTTTTTTTTTTTTTTT"), Chromosome("aaa"));
|
|
|
|
BOOST_TEST((
|
|
|
|
result1 == Chromosome("TTTTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result1 == Chromosome("aTTTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result1 == Chromosome("aaTTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result1 == Chromosome("aaaTTTTTTTTTTTTTTTTT")
|
|
|
|
));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST((
|
2020-02-13 22:44:06 +00:00
|
|
|
result2 == Chromosome("aaa") ||
|
|
|
|
result2 == Chromosome("Taa") ||
|
|
|
|
result2 == Chromosome("TTa") ||
|
|
|
|
result2 == Chromosome("TTT")
|
2020-02-06 03:34:09 +00:00
|
|
|
));
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(randomPointCrossover_should_never_split_at_position_zero_if_chromosomes_are_splittable)
|
|
|
|
{
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
function<Crossover> crossover = randomPointCrossover();
|
|
|
|
|
|
|
|
for (size_t i = 0; i < 30; ++i)
|
|
|
|
{
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result1 = crossover(Chromosome("aa"), Chromosome("TTTTTTTTTTTTTTTTTTTT"));
|
|
|
|
Chromosome result2 = crossover(Chromosome("TTTTTTTTTTTTTTTTTTTT"), Chromosome("aa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result1 != Chromosome("TTTTTTTTTTTTTTTTTTTT"));
|
|
|
|
BOOST_TEST(result2 != Chromosome("aa"));
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(randomPointCrossover_should_never_split_at_position_zero_if_chromosomes_are_not_empty)
|
|
|
|
{
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
function<Crossover> crossover = randomPointCrossover();
|
|
|
|
|
|
|
|
for (size_t i = 0; i < 30; ++i)
|
|
|
|
{
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result1 = crossover(Chromosome("a"), Chromosome("T"));
|
|
|
|
Chromosome result2 = crossover(Chromosome("T"), Chromosome("a"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result1 == Chromosome("a"));
|
|
|
|
BOOST_TEST(result2 == Chromosome("T"));
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(randomPointCrossover_should_work_even_if_one_chromosome_is_unsplittable)
|
|
|
|
{
|
|
|
|
function<Crossover> crossover = randomPointCrossover();
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
2020-02-13 22:44:06 +00:00
|
|
|
BOOST_CHECK(crossover(Chromosome("ff"), Chromosome("a")) == Chromosome("f"));
|
|
|
|
BOOST_CHECK(crossover(Chromosome("a"), Chromosome("ff")) == Chromosome("af"));
|
2020-02-06 03:34:09 +00:00
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(randomPointCrossover_should_split_at_position_zero_only_if_at_least_one_chromosome_is_empty)
|
|
|
|
{
|
|
|
|
Chromosome empty("");
|
|
|
|
Chromosome unsplittable("a");
|
|
|
|
Chromosome splittable("aaaa");
|
|
|
|
function<Crossover> crossover = randomPointCrossover();
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
2020-02-13 22:44:06 +00:00
|
|
|
BOOST_CHECK(crossover(empty, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover(unsplittable, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover(empty, unsplittable) == unsplittable);
|
|
|
|
BOOST_CHECK(crossover(splittable, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover(empty, splittable) == splittable);
|
2020-02-06 03:34:09 +00:00
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(fixedPointCrossover_should_swap_chromosome_parts_at_given_point)
|
|
|
|
{
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result1 = fixedPointCrossover(0.8)(Chromosome("aaaaaaaaaa"), Chromosome("cccccccccc"));
|
|
|
|
Chromosome result2 = fixedPointCrossover(0.8)(Chromosome("cccccccccc"), Chromosome("aaaaaaaaaa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result1 == Chromosome("aaaaaaaacc"));
|
|
|
|
BOOST_TEST(result2 == Chromosome("ccccccccaa"));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(fixedPointCrossover_should_determine_crossover_point_based_on_length_of_shorter_chromosome)
|
|
|
|
{
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result1 = fixedPointCrossover(0.4)(Chromosome("aaaaa"), Chromosome("cccccccccc"));
|
|
|
|
Chromosome result2 = fixedPointCrossover(0.4)(Chromosome("cccccccccc"), Chromosome("aaaaa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result1 == Chromosome("aacccccccc"));
|
|
|
|
BOOST_TEST(result2 == Chromosome("ccaaa"));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(fixedPointCrossover_should_round_split_point)
|
|
|
|
{
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result1 = fixedPointCrossover(0.49)(Chromosome("aaaaa"), Chromosome("ccccc"));
|
|
|
|
Chromosome result2 = fixedPointCrossover(0.49)(Chromosome("ccccc"), Chromosome("aaaaa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result1 == Chromosome("aaccc"));
|
|
|
|
BOOST_TEST(result2 == Chromosome("ccaaa"));
|
|
|
|
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result3 = fixedPointCrossover(0.50)(Chromosome("aaaaa"), Chromosome("ccccc"));
|
|
|
|
Chromosome result4 = fixedPointCrossover(0.50)(Chromosome("ccccc"), Chromosome("aaaaa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result3 == Chromosome("aaacc"));
|
|
|
|
BOOST_TEST(result4 == Chromosome("cccaa"));
|
|
|
|
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result5 = fixedPointCrossover(0.51)(Chromosome("aaaaa"), Chromosome("ccccc"));
|
|
|
|
Chromosome result6 = fixedPointCrossover(0.51)(Chromosome("ccccc"), Chromosome("aaaaa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result5 == Chromosome("aaacc"));
|
|
|
|
BOOST_TEST(result6 == Chromosome("cccaa"));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(fixedPointCrossover_should_split_at_position_zero_if_explicitly_requested)
|
|
|
|
{
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result1 = fixedPointCrossover(0.0)(Chromosome("aaaaa"), Chromosome("cccccccccc"));
|
|
|
|
Chromosome result2 = fixedPointCrossover(0.0)(Chromosome("cccccccccc"), Chromosome("aaaaa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result1 == Chromosome("cccccccccc"));
|
|
|
|
BOOST_TEST(result2 == Chromosome("aaaaa"));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(fixedPointCrossover_should_split_at_end_of_shorter_chromosome_if_crossover_point_is_after_last_position)
|
|
|
|
{
|
2020-02-13 22:44:06 +00:00
|
|
|
Chromosome result1 = fixedPointCrossover(1.0)(Chromosome("aaaaa"), Chromosome("cccccccccc"));
|
|
|
|
Chromosome result2 = fixedPointCrossover(1.0)(Chromosome("cccccccccc"), Chromosome("aaaaa"));
|
2020-02-06 03:34:09 +00:00
|
|
|
BOOST_TEST(result1 == Chromosome("aaaaaccccc"));
|
|
|
|
BOOST_TEST(result2 == Chromosome("ccccc"));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(fixedPointCrossover_should_select_correct_split_point_for_unsplittable_chromosomes)
|
|
|
|
{
|
|
|
|
function<Crossover> crossover00 = fixedPointCrossover(0.0);
|
2020-02-13 22:44:06 +00:00
|
|
|
BOOST_CHECK(crossover00(Chromosome("fff"), Chromosome("a")) == Chromosome("a"));
|
|
|
|
BOOST_CHECK(crossover00(Chromosome("a"), Chromosome("fff")) == Chromosome("fff"));
|
2020-02-06 03:34:09 +00:00
|
|
|
|
2020-02-13 22:44:06 +00:00
|
|
|
BOOST_CHECK(crossover00(Chromosome("f"), Chromosome("a")) == Chromosome("a"));
|
2020-02-06 03:34:09 +00:00
|
|
|
|
|
|
|
function<Crossover> crossover10 = fixedPointCrossover(1.0);
|
2020-02-13 22:44:06 +00:00
|
|
|
BOOST_CHECK(crossover10(Chromosome("fff"), Chromosome("a")) == Chromosome("f"));
|
|
|
|
BOOST_CHECK(crossover10(Chromosome("a"), Chromosome("fff")) == Chromosome("aff"));
|
2020-02-06 03:34:09 +00:00
|
|
|
|
2020-02-13 22:44:06 +00:00
|
|
|
BOOST_CHECK(crossover10(Chromosome("f"), Chromosome("a")) == Chromosome("f"));
|
2020-02-06 03:34:09 +00:00
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(fixedPointCrossover_should_always_use_position_zero_as_split_point_when_chromosome_empty)
|
|
|
|
{
|
|
|
|
Chromosome empty("");
|
|
|
|
Chromosome unsplittable("f");
|
|
|
|
Chromosome splittable("aaaa");
|
|
|
|
|
|
|
|
function<Crossover> crossover00 = fixedPointCrossover(0.0);
|
2020-02-13 22:44:06 +00:00
|
|
|
BOOST_CHECK(crossover00(empty, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover00(unsplittable, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover00(empty, unsplittable) == unsplittable);
|
|
|
|
BOOST_CHECK(crossover00(splittable, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover00(empty, splittable) == splittable);
|
2020-02-06 03:34:09 +00:00
|
|
|
|
|
|
|
function<Crossover> crossover10 = fixedPointCrossover(1.0);
|
2020-02-13 22:44:06 +00:00
|
|
|
BOOST_CHECK(crossover10(empty, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover10(unsplittable, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover10(empty, unsplittable) == unsplittable);
|
|
|
|
BOOST_CHECK(crossover10(splittable, empty) == empty);
|
|
|
|
BOOST_CHECK(crossover10(empty, splittable) == splittable);
|
2020-02-06 03:34:09 +00:00
|
|
|
}
|
|
|
|
|
2020-03-11 02:49:16 +00:00
|
|
|
BOOST_AUTO_TEST_CASE(randomTwoPointCrossover_should_swap_chromosome_parts_between_two_random_points)
|
|
|
|
{
|
|
|
|
function<Crossover> crossover = randomTwoPointCrossover();
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
Chromosome result1 = crossover(Chromosome("aaaaaaaaaa"), Chromosome("cccccc"));
|
|
|
|
BOOST_TEST(result1 == Chromosome("aaacccaaaa"));
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
Chromosome result2 = crossover(Chromosome("cccccc"), Chromosome("aaaaaaaaaa"));
|
|
|
|
BOOST_TEST(result2 == Chromosome("cccaaa"));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(symmetricRandomTwoPointCrossover_should_swap_chromosome_parts_at_random_point)
|
|
|
|
{
|
|
|
|
function<SymmetricCrossover> crossover = symmetricRandomTwoPointCrossover();
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
tuple<Chromosome, Chromosome> result1 = crossover(Chromosome("aaaaaaaaaa"), Chromosome("cccccc"));
|
|
|
|
tuple<Chromosome, Chromosome> expectedPair1 = {Chromosome("aaacccaaaa"), Chromosome("cccaaa")};
|
|
|
|
BOOST_TEST(result1 == expectedPair1);
|
|
|
|
|
|
|
|
tuple<Chromosome, Chromosome> result2 = crossover(Chromosome("cccccc"), Chromosome("aaaaaaaaaa"));
|
|
|
|
tuple<Chromosome, Chromosome> expectedPair2 = {Chromosome("ccccca"), Chromosome("aaaaacaaaa")};
|
|
|
|
BOOST_TEST(result2 == expectedPair2);
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(randomTwoPointCrossover_should_only_consider_points_available_on_both_chromosomes)
|
|
|
|
{
|
|
|
|
function<Crossover> crossover = randomTwoPointCrossover();
|
|
|
|
|
|
|
|
for (size_t i = 0; i < 30; ++i)
|
|
|
|
{
|
|
|
|
Chromosome result1 = crossover(Chromosome("aaa"), Chromosome("TTTTTTTTTTTTTTTTTTTT"));
|
|
|
|
Chromosome result2 = crossover(Chromosome("TTTTTTTTTTTTTTTTTTTT"), Chromosome("aaa"));
|
|
|
|
BOOST_TEST((
|
|
|
|
result1 == Chromosome("aaa") ||
|
|
|
|
result1 == Chromosome("Taa") ||
|
|
|
|
result1 == Chromosome("TTa") ||
|
|
|
|
result1 == Chromosome("TTT") ||
|
|
|
|
result1 == Chromosome("aTa") ||
|
|
|
|
result1 == Chromosome("aTT") ||
|
|
|
|
result1 == Chromosome("aaT")
|
|
|
|
));
|
|
|
|
BOOST_TEST((
|
|
|
|
result2 == Chromosome("TTTTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result2 == Chromosome("aTTTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result2 == Chromosome("aaTTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result2 == Chromosome("aaaTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result2 == Chromosome("TaTTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result2 == Chromosome("TaaTTTTTTTTTTTTTTTTT") ||
|
|
|
|
result2 == Chromosome("TTaTTTTTTTTTTTTTTTTT")
|
|
|
|
));
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(uniformCrossover_should_swap_randomly_selected_genes)
|
|
|
|
{
|
|
|
|
function<Crossover> crossover = uniformCrossover(0.7);
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
Chromosome result1 = crossover(Chromosome("aaaaaaaaaa"), Chromosome("cccccc"));
|
|
|
|
BOOST_TEST(result1 == Chromosome("caaacc"));
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
Chromosome result2 = crossover(Chromosome("cccccc"), Chromosome("aaaaaaaaaa"));
|
|
|
|
BOOST_TEST(result2 == Chromosome("acccaaaaaa"));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(symmetricUniformCrossover_should_swap_randomly_selected_genes)
|
|
|
|
{
|
|
|
|
function<SymmetricCrossover> crossover = symmetricUniformCrossover(0.7);
|
|
|
|
|
|
|
|
SimulationRNG::reset(1);
|
|
|
|
tuple<Chromosome, Chromosome> result1 = crossover(Chromosome("aaaaaaaaaa"), Chromosome("cccccc"));
|
|
|
|
tuple<Chromosome, Chromosome> expectedPair1 = {Chromosome("caaacc"), Chromosome("acccaaaaaa")};
|
|
|
|
BOOST_TEST(result1 == expectedPair1);
|
|
|
|
|
|
|
|
tuple<Chromosome, Chromosome> result2 = crossover(Chromosome("cccccc"), Chromosome("aaaaaaaaaa"));
|
|
|
|
tuple<Chromosome, Chromosome> expectedPair2 = {Chromosome("caaaaaaaaa"), Chromosome("accccc")};
|
|
|
|
BOOST_TEST(result2 == expectedPair2);
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(uniformCrossover_should_only_consider_points_available_on_both_chromosomes)
|
|
|
|
{
|
|
|
|
function<Crossover> crossover = uniformCrossover(0.7);
|
|
|
|
|
|
|
|
set<string> expectedPatterns = {
|
|
|
|
"TTTTTTTTTTTTTTTTTTTT",
|
|
|
|
"aTTTTTTTTTTTTTTTTTTT",
|
|
|
|
"TaTTTTTTTTTTTTTTTTTT",
|
|
|
|
"TTaTTTTTTTTTTTTTTTTT",
|
|
|
|
"aaTTTTTTTTTTTTTTTTTT",
|
|
|
|
"TaaTTTTTTTTTTTTTTTTT",
|
|
|
|
"aTaTTTTTTTTTTTTTTTTT",
|
|
|
|
"aaaTTTTTTTTTTTTTTTTT",
|
|
|
|
"aaa",
|
|
|
|
"Taa",
|
|
|
|
"aTa",
|
|
|
|
"aaT",
|
|
|
|
"TTa",
|
|
|
|
"aTT",
|
|
|
|
"TaT",
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"TTT",
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};
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for (size_t i = 0; i < 30; ++i)
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{
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Chromosome result1 = crossover(Chromosome("aaa"), Chromosome("TTTTTTTTTTTTTTTTTTTT"));
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Chromosome result2 = crossover(Chromosome("TTTTTTTTTTTTTTTTTTTT"), Chromosome("aaa"));
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BOOST_TEST(expectedPatterns.count(toString(result1)) == 1);
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BOOST_TEST(expectedPatterns.count(toString(result2)) == 1);
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}
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}
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BOOST_AUTO_TEST_CASE(uniformCrossover_should_not_swap_anything_if_chance_is_zero)
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{
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BOOST_TEST(uniformCrossover(0.0)(Chromosome("aaaaaaaaaa"), Chromosome("cccccc")) == Chromosome("aaaaaaaaaa"));
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BOOST_TEST(uniformCrossover(0.0)(Chromosome("cccccc"), Chromosome("aaaaaaaaaa")) == Chromosome("cccccc"));
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}
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BOOST_AUTO_TEST_CASE(uniformCrossover_should_swap_whole_chromosomes_if_chance_is_one)
|
|
|
|
{
|
|
|
|
BOOST_TEST(uniformCrossover(1.0)(Chromosome("aaaaaaaaaa"), Chromosome("cccccc")) == Chromosome("cccccc"));
|
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|
|
BOOST_TEST(uniformCrossover(1.0)(Chromosome("cccccc"), Chromosome("aaaaaaaaaa")) == Chromosome("aaaaaaaaaa"));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(uniformCrossover_should_swap_genes_with_uniform_probability)
|
|
|
|
{
|
|
|
|
constexpr size_t operationCount = 1000;
|
|
|
|
constexpr double swapChance = 0.8;
|
|
|
|
constexpr double relativeTolerance = 0.05;
|
|
|
|
double const expectedValue = swapChance;
|
|
|
|
double const variance = swapChance * (1 - swapChance);
|
|
|
|
|
|
|
|
function<Crossover> crossover = uniformCrossover(swapChance);
|
|
|
|
Chromosome chromosome1("aaaaaaaaaa");
|
|
|
|
Chromosome chromosome2("cccccccccc");
|
|
|
|
|
|
|
|
vector<size_t> bernoulliTrials;
|
|
|
|
for (size_t i = 0; i < operationCount; ++i)
|
|
|
|
{
|
|
|
|
string genes = toString(crossover(chromosome1, chromosome2));
|
|
|
|
for (size_t j = 0; j < chromosome1.length(); ++j)
|
|
|
|
bernoulliTrials.push_back(static_cast<size_t>(genes[j] == 'c'));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_TEST(abs(mean(bernoulliTrials) - expectedValue) < expectedValue * relativeTolerance);
|
|
|
|
BOOST_TEST(abs(meanSquaredError(bernoulliTrials, expectedValue) - variance) < variance * relativeTolerance);
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_AUTO_TEST_CASE(uniformCrossover_should_swap_tail_with_uniform_probability)
|
|
|
|
{
|
|
|
|
constexpr size_t operationCount = 1000;
|
|
|
|
constexpr double swapChance = 0.3;
|
|
|
|
constexpr double relativeTolerance = 0.05;
|
|
|
|
double const expectedValue = swapChance;
|
|
|
|
double const variance = swapChance * (1 - swapChance);
|
|
|
|
|
|
|
|
function<Crossover> crossover = uniformCrossover(swapChance);
|
|
|
|
Chromosome chromosome1("aaaaa");
|
|
|
|
Chromosome chromosome2("cccccccccc");
|
|
|
|
|
|
|
|
vector<size_t> bernoulliTrials;
|
|
|
|
for (size_t i = 0; i < operationCount; ++i)
|
|
|
|
{
|
|
|
|
string genes = toString(crossover(chromosome1, chromosome2));
|
|
|
|
BOOST_REQUIRE(genes.size() == 5 || genes.size() == 10);
|
|
|
|
bernoulliTrials.push_back(static_cast<size_t>(genes.size() == 10));
|
|
|
|
}
|
|
|
|
|
|
|
|
BOOST_TEST(abs(mean(bernoulliTrials) - expectedValue) < expectedValue * relativeTolerance);
|
|
|
|
BOOST_TEST(abs(meanSquaredError(bernoulliTrials, expectedValue) - variance) < variance * relativeTolerance);
|
|
|
|
}
|
|
|
|
|
2020-02-05 13:42:38 +00:00
|
|
|
BOOST_AUTO_TEST_SUITE_END()
|
|
|
|
BOOST_AUTO_TEST_SUITE_END()
|
|
|
|
BOOST_AUTO_TEST_SUITE_END()
|
|
|
|
|
|
|
|
}
|