wip, jupyter in docker

This commit is contained in:
Yusef Napora 2020-06-19 17:56:59 -04:00
parent f29141b855
commit 9323fd896a
7 changed files with 2379 additions and 0 deletions

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.gitignore vendored
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lotus
venv/

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composer/Dockerfile Normal file
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FROM python:3.8-buster
WORKDIR /usr/src/app
RUN mkdir /jupyter && chmod 777 /jupyter
COPY requirements.txt ./
RUN pip install -r requirements.txt
COPY . .
VOLUME /testground/plans
VOLUME /jupyter/runtime
ENV TESTGROUND_HOME /testground
ENV HOME /jupyter
ENV JUPYTER_RUNTIME_DIR /jupyter/runtime
CMD ["jupyter", "notebook", "--allow-root", "--ip", "0.0.0.0"]

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composer/Makefile Normal file
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docker:
docker build . -t "iptestground/composer:latest"
all: docker

293
composer/app/composition.py Normal file
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import param
import panel as pn
import toml
import os
import sys
def parse_manifest(manifest_path):
with open(manifest_path, 'rt') as f:
return toml.load(f)
def tg_home():
return os.environ.get('TESTGROUND_HOME',
os.path.join(os.environ['HOME'], 'testground'))
def get_plans():
return list(os.listdir(os.path.join(tg_home(), 'plans')))
def get_manifest(plan_name):
manifest_path = os.path.join(tg_home(), 'plans', plan_name, 'manifest.toml')
return parse_manifest(manifest_path)
def print_err(*args):
print(*args, file=sys.stderr)
def value_dict(parameterized, renames=None):
d = dict()
if renames is None:
renames = dict()
for name, p in parameterized.param.objects().items():
if name == 'name':
continue
if name in renames:
name = renames[name]
val = p.__get__(parameterized, type(p))
if isinstance(val, param.Parameterized):
try:
val = val.to_dict()
except:
val = value_dict(val, renames=renames)
d[name] = val
return d
def make_group_params_class(testcase):
"""Returns a subclass of param.Parameterized whose params are defined by the
'params' dict inside of the given testcase dict"""
tc_params = dict()
for name, p in testcase.get('params', {}).items():
tc_params[name] = make_param(p)
cls = param.parameterized_class('Test Params for testcase {}'.format(testcase.get('name', '')), tc_params, Base)
return cls
def make_param(pdef):
"""
:param pdef: a parameter definition dict from a testground plan manifest
:return: a param.Parameter that has the type, bounds, default value, etc from the definition
"""
typ = pdef['type'].lower()
if typ == 'int':
return num_param(pdef, cls=param.Integer)
elif typ == 'float':
return num_param(pdef)
elif typ.startswith('bool'):
return bool_param(pdef)
else:
return str_param(pdef)
def num_param(pdef, cls=param.Number):
lo = pdef.get('min', None)
hi = pdef.get('max', None)
bounds = (lo, hi)
if lo == hi and lo is not None:
bounds = None
default_val = pdef.get('default', None)
if default_val is not None:
if cls == param.Integer:
default_val = int(default_val)
else:
default_val = float(default_val)
return cls(default=default_val, bounds=bounds, doc=pdef.get('desc', ''))
def bool_param(pdef):
default_val = str(pdef.get('default', 'false')).lower() == 'true'
return param.Boolean(
doc=pdef.get('desc', ''),
default=default_val
)
def str_param(pdef):
return param.String(
default=pdef.get('default', ''),
doc=pdef.get('desc', ''),
)
class Base(param.Parameterized):
@classmethod
def from_dict(cls, d):
return cls(**d)
def to_dict(self):
return value_dict(self)
class Metadata(Base):
composition_name = param.String()
author = param.String()
@classmethod
def from_dict(cls, d):
d['composition_name'] = d.get('name', '')
del d['name']
return Metadata(**d)
def to_dict(self):
return value_dict(self, {'composition_name': 'name'})
class Global(Base):
plan = param.String()
case = param.String()
builder = param.String()
runner = param.String()
# TODO: link to instance counts in groups
total_instances = param.Integer()
# TODO: add ui widget for key/value maps instead of using Dict param type
build_config = param.Dict(default={}, allow_None=True)
run_config = param.Dict(default={}, allow_None=True)
class Resources(Base):
memory = param.String(allow_None=True)
cpu = param.String(allow_None=True)
class Instances(Base):
count = param.Integer(allow_None=True)
percentage = param.Number(allow_None=True)
class Dependency(Base):
module = param.String()
version = param.String()
class Build(Base):
selectors = param.List(class_=str, allow_None=True)
dependencies = param.List(allow_None=True)
class Group(Base):
id = param.String()
instances = param.Parameter(Instances, precedence=-1)
resources = param.Parameter(Resources, allow_None=True, precedence=-1)
build = param.Parameter(Build, precedence=-1)
params = param.Parameter(precedence=-1)
def __init__(self, params_class=None, **params):
super().__init__(**params)
if params_class is not None:
self.params = params_class()
self._set_name(self.id)
@classmethod
def from_dict(cls, d, params_class=None):
return Group(
id=d['id'],
resources=Resources.from_dict(d.get('resources', {})),
instances=Instances.from_dict(d.get('instances', {})),
build=Build.from_dict(d.get('build', {})),
params=params_class.from_dict(d.get('params', {})),
)
@param.depends('id', watch=True)
def panel(self):
return pn.Column(
"**Group: {}**".format(self.id),
self.instances,
self.resources,
self.build,
self.params
)
class Composition(param.Parameterized):
metadata = param.Parameter(Metadata, precedence=-1)
global_config = param.Parameter(Global, precedence=-1)
groups = param.ObjectSelector()
groups_ui = None
def __init__(self, manifest=None, **params):
super(Composition, self).__init__(**params)
self.manifest = manifest
self.testcase_param_classes = dict()
self._set_manifest(manifest)
@classmethod
def from_dict(cls, d, manifest=None):
if manifest is None:
try:
manifest = get_manifest(d['global']['plan'])
except FileNotFoundError:
print_err("Unable to find manifest for test plan {}. Please import into $TESTGROUND_HOME/plans and try again".format(d['global']['plan']))
c = Composition(
manifest=manifest,
metadata=Metadata.from_dict(d.get('metadata', {})),
global_config=Global.from_dict(d.get('global', {})),
)
params_class = c._params_class_for_current_testcase()
groups = [Group.from_dict(g, params_class=params_class) for g in d.get('groups', [])]
c.param['groups'].objects = groups
if len(groups) != 0:
c.groups = groups[0]
return c
@classmethod
def from_toml_file(cls, filename, manifest=None):
with open(filename, 'rt') as f:
d = toml.load(f)
return cls.from_dict(d, manifest=manifest)
@param.depends('groups', watch=True)
def panel(self):
add_group_button = pn.widgets.Button(name='Add Group')
add_group_button.on_click(self._add_group)
group_panel = self.groups.panel()
if self.groups_ui is None:
self.groups_ui = pn.Column(
add_group_button,
pn.Param(self.param['groups'], expand_button=False, expand=False),
group_panel,
)
else:
self.groups_ui.objects.pop()
self.groups_ui.append(group_panel)
return pn.Row(
pn.Column(self.metadata, self.global_config),
self.groups_ui,
)
def _set_manifest(self, manifest):
if manifest is None:
return
for tc in manifest.get('testcases', []):
self.testcase_param_classes[tc['name']] = make_group_params_class(tc)
@param.depends("global_config.case", watch=True)
def _params_class_for_current_testcase(self):
case = self.global_config.case
cls = self.testcase_param_classes.get(case, None)
if cls is None:
print_err("No testcase found in manifest named " + case)
return cls
def _add_group(self, evt):
g = Group(id='New Group', params_class=self._params_class_for_current_testcase())
groups = self.param['groups'].objects
groups.append(g)
self.param['groups'].objects = groups
self.groups = g
def to_dict(self):
return {
'metadata': value_dict(self.metadata, renames={'composition_name': 'name'}),
'global': value_dict(self.global_config),
'groups': [g.to_dict() for g in self.param['groups'].objects]
}
def to_toml(self):
return toml.dumps(self.to_dict())
def write_to_file(self, filename):
with open(filename, 'wt') as f:
toml.dump(self.to_dict(), f)

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composer/composer.ipynb Normal file

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composer/composer.sh Executable file
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#!/bin/bash
# this script runs jupyter inside a docker container and copies
# plan manifests from the user's local filesystem into a temporary
# directory that's bind-mounted into the container.
image_name="iptestground/composer"
image_tag="latest"
image_full_name="$image_name:$image_tag"
tg_home=${TESTGROUND_HOME:-$HOME/testground}
container_plans_dir="/testground/plans"
jupyter_port=${JUPYTER_PORT:-8888}
poll_interval=30
exists() {
command -v "$1" >/dev/null 2>&1
}
require_cmds() {
for cmd in $@; do
exists $cmd || { echo "This script requires the $cmd command. Please install it and try again." >&2; exit 1; }
done
}
get_manifest_paths() {
find -L $tg_home/plans -name manifest.toml
}
update_manifests() {
local dest_dir=$1
mkdir -p $dest_dir
for m in $(get_manifest_paths); do
local plan=$(basename $(dirname $m))
local dest="$dest_dir/$plan/manifest.toml"
mkdir -p "$dest_dir/$plan"
# only copy if source manifest is newer than dest (or dest doesn't exist)
if [[ ! -e $dest || $m -nt $dest ]]; then
cp $m $dest
fi
done
}
watch_manifests() {
local manifest_dest=$1
while true; do
update_manifests ${manifest_dest}
sleep $poll_interval
done
}
open_url() {
local url=$1
if exists cmd.exe; then
cmd.exe /c start ${url} >/dev/null 2>&1
elif exists xdg-open; then
xdg-open ${url} >/dev/null 2>&1 &
elif exists open; then
open ${url}
else
echo "unable to automatically open url. copy/paste this into a browser: $url"
fi
}
# delete temp dir and stop docker container
cleanup () {
if [[ "$container_id" != "" ]]; then
docker stop ${container_id} >/dev/null
fi
if [[ -d "$temp_manifest_dir" ]]; then
rm -rf ${temp_manifest_dir}
fi
if [[ -d "$temp_jupyter_runtime_dir" ]]; then
rm -rf ${temp_jupyter_runtime_dir}
fi
}
# run cleanup on exit
trap "{ cleanup; }" EXIT
# make sure we have the commands we need
require_cmds jq docker
# make temp dir for manifests
temp_base="/tmp"
if [[ "$TEMP" != "" ]]; then
temp_base=$TEMP
fi
temp_manifest_dir="$(mktemp -d ${temp_base}/testground-composer-XXXX)"
temp_jupyter_runtime_dir="$(mktemp -d ${temp_base}/testground-composer-jupyter-XXXX)"
echo "temp manifest dir: $temp_manifest_dir"
echo "temp jupyter dir: $temp_jupyter_runtime_dir"
# copy the manifests to the temp dir
update_manifests ${temp_manifest_dir}
# run the container in detached mode and grab the id
container_id=$(docker run -d --user $(id -u):$(id -g) -p ${jupyter_port}:8888 -v ${temp_manifest_dir}:${container_plans_dir}:ro -v ${temp_jupyter_runtime_dir}:/jupyter/runtime $image_full_name)
echo "container $container_id started"
# print the log output
docker logs -f ${container_id} &
while [[ ! -f ${temp_jupyter_runtime_dir}/nbserver-1.json ]]; do
sleep 1
done
token=$(jq -r '.token' ${temp_jupyter_runtime_dir}/nbserver-1.json)
jupyter_url="http://localhost:${jupyter_port}/?token=${token}"
echo "Jupyter url: $jupyter_url"
open_url $jupyter_url
# poll & check for manifest changes every few seconds
watch_manifests ${temp_manifest_dir}

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param
toml
jupyter
panel
holoviews